Marmota marmota marmota (Alpine marmot): 107144871
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Entry
107144871 CDS
T09644
Symbol
Chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X2
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107144871 (Chd9)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107144871 (Chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107144871
NCBI-ProteinID:
XP_015344222
Ensembl:
ENSMMMG00000012811
LinkDB
All DBs
Position
Unknown
AA seq
2898 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVHGTP
THQKMTDFEQLNQFDTMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATNISNQNGSPFHQQGHSHSMHQNKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNTLTPGQNSLSQSKNFMDVNVPGPHRVNVNHPSQITNASTSQQSLSMQFSQTSNPSV
HFLKCNNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLAPNHAN
QTLSDFTGSNSFSPHRGIKQESTQHILNPNASLNSNNFQMLHSSHPQGNYSNSKLSPVHM
NFPDPVDSGTQMGHFSDHVETNGFSSLEDNLLHQVESQPEPFTGLDPEDLLQEGLLPQFD
ESTFGQDNSNHVLDHDLDRHFTSHIVARPSDMAQTQLQCQARSWHSSFSNHQHLHDRNRL
CLQRQPPSSKKNDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASVEGKEEKKGRRTKSKPKDKDNKKTKTCSKLKEKTKIGKLII
TLGKKQKRKNESSDEISDAEHMPPHTFKDQDSQKRRSNRQIKRKKYAEDAEGKQSEEEVK
GSLKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVIIDTEEFFVK
YKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADIEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQALRPDTRHLER
PPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQ
GRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPAATDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISG
RNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDA
DKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDFMDGDVEDPEYKP
APAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKNR
QIQQIQPTFSVPASVMHPLYDEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDP
DRGQFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEE
RASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGV
SRTDYHILRDPELSFMAAQRNYSQSKMTHSRTSTPLLQQYQVALSTSPLTSLPRLLDAKG
IILEDMKVKSETLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLSQATGDQKSGGKVE
TDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSH
SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEEEVQKRESTPHMKAYDEES
VASLSTTQDETQDSFQINNGTPESAYFLQGGYMLAASYWPKDRVMINRLDSICQTVLKGK
WPSARRSYDANTVASFYTTKLLDSPGAAAEYSEPSVPTPPGAGVKEEHDQSTQMSKVKKH
VREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDSEDGALGQQQYLTRLRELQSASETSLVN
FPKSMPVSGTSIQSTIGANGVILDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGL
TTSQISTGINPTLSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY
VEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNTLTGEERVQLINRRNARKVGGAFAPP
LKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIA
KATAATAANATNVSGNPLLTNGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSS
GGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKPADSGAEEKKGNDSKEQEGKKERTESQ
SSDNGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLS
QSNTFDVQKSKNSDLGSSKSVEVKEEDSRVKDQEDKRGTEPSPLNENSTDDGSEKADASS
GSDSTSSSSEDSDSSNED
NT seq
8697 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttatcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagagtttgaacctttgcatatagactcattgaaccatgttcatggtacacca
acacatcagaagatgactgattttgaacagttaaatcaatttgatacaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatcaccacactctcagttt
aattgttctcctatccatccccaaaaccagcccaatggtttgtttccagatgtggcagat
ggcagtcctatgtggggtcatcagacagctactaacatttctaatcaaaatggatctcct
tttcaccaacaaggacattcgcattctatgcatcagaataaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgtacttcactacgctcacaa
caaaatagaaatactcttaccccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgttcctggtcctcatagagtcaatgttaaccacccatcacaaatcactaat
gcatctacttcacaacagtctctttcgatgcagttttctcaaacatcaaatccttcagta
cacttcctcaagtgtaacaatcatcaagaaggaaattttaatggaccttctccaaatatg
acttcttgttctgtcagtaattctcagcagttttcttcacattattccttttctagtaat
catatttcacccaacagtctccttcagtcctctgcagttcttgcacccaatcatgcaaat
cagactttatctgattttactggaagtaattccttttcacctcataggggaatcaagcag
gaatctactcagcatatcctaaaccccaatgcatcattgaattcaaataatttccaaatg
ttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgtgcatatg
aactttccagatcctgttgactcaggaactcaaatgggccatttcagtgatcacgtagaa
actaatggcttttcatctttagaagacaatttacttcatcaagtggagtctcaacctgag
ccattcacaggacttgacccagaggacctccttcaggagggtctgcttccgcaatttgat
gagtcaacatttggacaagataattccaatcatgttttagatcatgaccttgatcgacac
tttacttcacatattgtagctcggccttctgatatggctcaaactcagttgcaatgtcag
gctcggagttggcattcatcattttctaatcatcagcatttacacgacagaaatcgcctg
tgtttacaacgacagcctccatcttccaagaagaatgatggttctgggacatatactaag
ttgcagaatacccaggtgagggtcatgtctgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaaggag
cgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagtt
gaaggcaaagaggaaaagaaaggtagaaggacaaaatccaagccaaaggacaaagacaac
aaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattatt
acattgggtaagaaacagaaaagaaaaaatgaatcttcagatgaaatatctgatgcagag
catatgccaccacatacattcaaagatcaagactctcaaaaaagaagatcaaatagacaa
attaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggttaaa
ggctctttgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacaatta
tttgtggagaacccaagtgaagaagatgctgcaattgtagacaaaatactgtcttctaga
attgtaaagaaggaaatatcacctggagtgatcattgatacagaagaattttttgtaaaa
tacaagaattactcctatcttcactgtgaatgggccacagaagagcagcttttgaaagat
aaaaggattcagcagaaaattaaacgattcaaactgagacaagcacaaagagcacatttt
tttgcagatattgaagaagaaccatttaacccagactatgttgaagtagacagagtatta
gaagtctctttttgtgaagataaggatactggtgagcctgttatttactacctagtaaag
tggtgctcattgccatatgaagatagtacatgggaactaaaggaagatgtagatctggca
aaaatagaagagtttgaacaactacaagctttgagacctgacacaagacatttggaacgt
ccgccctctaatatttggaagaaaatagatcaatccagggactataaaaatggcaatcaa
ctcagggaatatcaactggaaggactcaactggctcttgttcaattggtacaacagacga
aactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattcctc
tacgaaatccttctgactggtataagaggacccttcctgattattgcaccactttctacc
attgcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttatcat
ggaagcctgattagcagacagatgatacagcaatatgagatgtacttcagggactcacag
gggcgcattattcgaggagcatacagattccaagctatcatcaccacttttgaaatgatt
cttggaggctgtggagagcttaatgcaattgaatggcgatgtgtaattattgatgaagca
cacaggttaaaaaataaaaactgtaaactcctagaaggtctgaagctcatgaacctggaa
cacaaggtgcttttgactggcactcctctccaaaatacagttgaagaacttttcagtctt
cttcactttcttgaacccttaaggtttccttctgaatcaacatttatgcaagaatttgga
gatctgaaaacagaggaacaggtgcaaaaacttcaagctatcctgaaaccaatgatgttg
agacgattaaaagaagatgttgaaaagaaattggcacctaaggaagaaactatcattgaa
gtagaacttactaacattcaaaaaaaatactaccgagctattttggagaagaatttttca
tttttgtctaaaggagcaggacagactaatgtacctaacttggtcaacaccatgatggaa
cttagaaaatgctgtaatcatccatatcttatcaaaggtgctgaggagaaaatacttgga
gaatttagagatacatataatccagctgctactgattttcatcttcaagcaatgattcag
tcagctggtaaattggtccttattgataaattgcttcccaaaatgaaagcaggaggtcat
aaagtgctcatattctctcagatggtacgctgccttgatattctggaggactatcttata
cataaaagatatttatatgagcgaatcgatggaagagtcagagggaatcttcgacaagct
gctatagatcgatttagtaaacctgattcagatcgatttgtttttcttctgtgtacccga
gctggtgggttgggcatcaatttaactgcagctgacacatgtataatttttgattctgat
tggaaccctcaaaatgaccttcaggcccaagctcgttgccacagaattggtcagaacaaa
gcagttaaagtctacagattagttactcgtaattcatatgagagagagatgtttgaccga
gccagtctgaaattgggcctagataaagctgtgttacagagcatgagtggaagagaaagt
aatgttggtggtattcaacagctttccaaaaaggaaatagaagacctgcttcgaagaggt
gcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaggatata
gatcagattttactgcgtcgtacaaaaacgattacaattgaatcagaaggacgtgggtca
acatttgccaaggcaagttttgtggcatctggaaaccggacagatatttccttagatgat
cccaatttctggcaaaaatgggctaaaaaagcagaaatagatattgatgccatcagtggc
agaaacagcttggttattgacactccaagaattaggaaacaaacaagaccctttagtgcc
acaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaaacccaaa
ctacggagaccctgtgatcgttccaatggctatggaagaactgaatgcttcagagtagag
aaaaacttgctagtttatgggtggggccgatggagagagattctgtctcatggacgtttt
aaaaggcagttaaatgagcacgatgtagaaataatttgccgagctctcttggcatattgc
cttgttcactaccgaggagatgagaaaattaaaggtttcatatgggatcttattactcca
actgaagatgggcagacacgagagttacaaaatcatctaggcctatcagctcctgtaccc
aggggtcgaaaagggaaaaaagtgaagactcagacaagttcatttgatatacaaaaagca
gaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggctacaaaaaacat
ataaaacaccactgtaataaagttttgcttcgtgtaagaatgctatattatctaaagcaa
gaagtcattggtaatgagtgtcagaaagtatttgatggagtagatgcaagtgatattgat
gtttgggtaccagaaccagaccattcagaagttcctgctgagtggtgggactttgacgct
gataagtctctccttataggggtttttaaacatggatatgaaaaatataacactatccga
gcagacccagcattatgcttcttggaaagagtgggaaaacctgatgataaagcagttgct
gctgaacagagagccaatgattttatggatggggatgtggaagatccagaatacaagcct
gccccagccatctttaaagatgatatagaggatgatgtttcctcacccggagatcttgtt
atagcagatggagatggtcaactgatggagggtgataaaatttattggcctactcagtca
gctttaaccacacggttgagacgactcatcactgcatatcagcgtactaataaaaacaga
caaatccagcagatacaaccaaccttctcagtgcctgccagtgtaatgcatcctctttat
gatgaagccactcttaatcctaaaatggcagccaagatagaaagacaacagagatggacc
agaagagaagaagctgacttttatcgagttgtatctacatttggagttgtttttgaccct
gatcgaggccaatttgattggacaaaatttagagctatggctaggttacataagaaaact
gatgaaagtttggagaaatatttgtatgcattcatgtccatgtgtcggagggtttgtcgt
cttccttccaaagaagaattggtagatccaaatatttttatccaaccaatcacagaagaa
cgggcttctaggactttgtatcgcattgaacttctaaggaaagtacgggagcaggccctt
cgacatccacagttgtttgaacgcttgaagctttgccatccaaatccagacttgccagtc
tggtgggaatgtggccctcatgatagagatttgcttattggcgctgctaaacatggggtc
agccgaacagattatcatattcttcgtgatcctgagctctcatttatggcagctcaaagg
aactacagtcaaagtaagatgactcattcaaggacgtctaccccacttttacagcaatac
caagtagcactttccacttctcctcttacttctttacctaggcttctagatgctaaaggt
attattctagaggatatgaaagttaaaagtgaaacccttaaagaagagcctcagtcttct
gaagaagaatctatgtcttctgtggaaaccaggacactaataaagtctgagcctgtaagt
ccaaagaatggtgttttatcacaggctactggagaccagaaatctggtggaaaagttgaa
acagacagacgcatggttgcagccagaacagaacccctaactccaaacccagcttctaag
aaacagagagtccacaaaagaggatcagaatctagttctgattctgattctgattctgag
agatcatcctgttcttccagatcatcatcttcttcgtcttcctcctcttcttgttcccat
tctcgatcaggctctagttcttcttcatcctcatcatgttcgtcagcatcatcttcatct
tcctcctcctcttcctcctcctcatcctcttcatcttcatcagaagaaagtgacagtgaa
gaagaggaagtccaaaagcgagaaagtacccctcacatgaaagcctatgatgaagaaagt
gttgcatcactgagcactacccaggatgagacccaggatagtttccaaataaacaatggg
acaccagaatctgcttacttcttacagggtggatacatgctggcagcttcatattggcca
aaggatcgtgtgatgatcaaccggctggacagtatttgtcaaacagttctgaaagggaag
tggccttctgctagaagaagttatgatgctaacacagtggcttctttctataccacaaaa
ctactggacagccccggagcagctgcagaatatagcgagcccagtgttcccactccccca
ggtgctggtgtcaaagaagaacatgatcagtcaacacagatgtcaaaggtgaagaagcat
gtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttgacattt
cagaagcaagggcttgcccaaaaaagaccatttgatagtgaagatggtgctctggggcag
cagcagtacctgactcgacttcgggaacttcaaagtgcgtcagagacaagcctcgtcaat
tttccaaaatctatgcctgtatcaggaacttccattcaatcaacaattggtgccaatgga
gtgatattagacaaccagcctgtagtcaaaaaaaggcgaggaaggaggaagaatgtagaa
ggtgttgacatcctcttttttaacagaaataaaccacctaatcatgttactttaggttta
accacctcacagatttccacagggataaatccaacactatcatatactcaacctcaagga
attcctgatacagaaagtccagttccagttattaatcttaaagatgggacaagacttgca
ggagatgatgcaccgaagagaaaggatttagaaaaatggcttaaggagcacccaggttat
gtggaagacttaggagcttttattcctagagtgcagcttcatgagggaagacccaaacaa
aaaaggcatcgttgcagaaaccccaataaacttgatgttaatactctgactggagaagaa
cgcgttcagctgattaacagaagaaatgccagaaaggttggaggtgcatttgctccccct
ttgaaagacttatgtagattcctgaaagaaaattcagaatatggagtagctcctgaatgg
ggagatgttgttaagcaatctgggtttcttccagaaagtatgtatgaacgtattctcact
ggtccagtggtgagagaggaagtaagcaggcgagggagacgccctaaaagtggaattgca
aaggccacagcagcaacagctgcaaatgccaccaatgtttcaggcaatcctttgttaacg
aatggattacttccaggtgtggatctcacaactcttcaggccttacaacaaaatctacag
aacttgcaatcactgcaagtaactgcagggctaatgggaatgcctgctggcctttcttct
ggaggagaagctaaaaacatggctgctatgttccccatgctgctatcaggaatggcggga
ttaccaaatctgttgggcatgggaggactccttacaaagcctgcagattctggggcagaa
gagaaaaagggaaatgactctaaggagcaagaaggaaaaaaagaaaggacagagagccaa
agttcagacaatggtggagaaaactctgtgtcaagttctccttcaacttcctcaactgct
gcattaaatacagctgcagctgccaacccgttagctcttaatccactattgctatctaat
atactttatccagggatgcttctcactccaggccttaatcttcatattccaactttgtcc
cagtccaatacttttgatgtacagaaaagcaaaaacagtgacttaggctcatctaagtct
gtagaagtaaaggaagaagattccagagttaaagatcaggaagacaaacggggaactgaa
ccaagtcctctcaatgaaaacagcacagatgatggttcagagaaagctgatgcttcatct
ggatctgatagtacatcatcatcatccgaggattcagattctagtaatgaagactga
DBGET
integrated database retrieval system
