Marmota marmota marmota (Alpine marmot): 107145045
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Entry
107145045 CDS
T09644
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
107145045 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107145045 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
AAA_16
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
NACHT
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
KNTC1_N
Beta-prop_SPT8
Nucleoporin_N
Beta-prop_DCAF4
AAA_22
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
Beta-prop_LRRK2
WDR90_beta-prop_4th
NPHP3_N
CNH
Beta-prop_Nup120_160
Beta-prop_Vps41
AAA
ATPase_2
DUF4062
RNA_helicase
AAA_5
Beta-prop_RIG_1st
AAA_28
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107145045
NCBI-ProteinID:
XP_048651312
Ensembl:
ENSMMMG00000023213
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MDAEREALQSAACPQVQTFCQKHGLTFEVVDLRWGIQNTEATDHMTTEICLEELDRCRKT
SIGPAFVALVGDQYGPCPVPSVIEEKEWEALRAQLTTRPRDLELVARRFRRDENSVPPTY
VLQATGGREAPGPEEATLTSVLRSGAQEAWRRGLISQEQWHRHHRSVIEWEIERGLLGSV
AGEQGATVFLREIQDLNKHILEDGALKMVDRLADGCLDTDAQNLLRDLKGRITDTHPGVL
KTHRLPWSRDLVNPKNKAHARYLRELGEQFVARADHQVLKHLRELELARQDLAWLYQEIR
HHLWQSAEATGTFCGRRELLAQLGQRLRRDDSQPHGPVVLFGPPGVGKSALMCKLAEQMP
GLLGHKTVTVLRLLGTSQMSSDACSLLKSLCFQVCLAFGLPPPPPQVLEAQARVAQLLRG
LLHTVSRRNFESLVLLLDSVDDLDSVRGSRRIPWLPLRCPPKVHLILSACSGQRGALDTV
RRTVADPEAYWEVRPLSGNQGQEMIQLLLVAARRTLSPTQRDLLWASLPDCGHPGRLRLA
FEEARKWASFTVPVPLASTAEEATHQLCARLEQTHGQLLVAHVLGYIVSSRHGLSEAELK
DVLSLDDEVLQVVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLARRPADGLTLLGIAHRM
RDLAPRRQLPASLLPRQVAPQPLWFSDTVANQRKLKELPHHLLHSGRLEELKQEVLGSMS
WICCRGISGGIESLLDDFDMCVPHVDSPEVGLVREALQLCRPALELRGLGESGCPAGGLF
AAWPDLAMNVDFGPHGVSGNLGSATYGSHHCLFCMAAGITAMAWSLEEKLLVVGTQDGLV
AVWDMEEQQVVHILTGHTGEVRCVKVFAEGILAISASKDHTLRVWNLLSGQEKFSIWDGG
SKNSTEPQIWNLHVDETNKIMYSTSGSKIHAWSLETAELVFRILGDGADPWVSTAVLPSQ
TRLLTVSRGGEVTLWNSATGSLQGKHRLSSIKEEAPTCAVSVQTQGKVVTGFSDGSVSLV
SPGGDRLLEKLPEAVGFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMTNDLEHEDVVE
TAVFGAENNLIVTGSRDALIQVWSLSEQGTLLDVLEGVGAPASLLVRGGALVASASQQSS
SFKVWDLTCTQRPRALAPFLDRTGLTAVSHNGSYIYFPKIGDKNKVTIWDVAEGEEQDSL
DTSNEVKCLEVAEQAQLLFAGLVSGIVLVFPLNSRQDVMCIPPPEARKAINCMSLSKNED
RLAIAYDNIVLVLDISPGDPCPVIDGPTYTFYTQLPETIACVAVLTDYRVVYGMTNGDLF
LYECANSKVFPLEAHRSQVTCVEVSHQEQLAVSGSEEALLCLWELEACKWKFKMSYTSSF
CRGVQCACFSKDDKFVYVGLKDRSIIVWSVLDGTLLAVQFVHAVVNRIIPTSNGFIAPTR
HGYLIRERFHCPSLRASQEDPLKNFKKAVWMVKSRQREELAAAAETPQDLTSQSAQGNKS
RSNKHSQVCLLV
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagagggaggccctgcagtctgccgcctgcccacaagtgcagaccttctgc
caaaagcatggcctgacattcgaggttgttgatctgaggtggggaattcagaacacggag
gccactgaccacatgaccaccgaaatctgcttggaagagctggaccggtgtcgcaagacg
tccatcgggccagcttttgttgcccttgtaggtgaccagtatggcccctgtccagtcccc
tcagtgatcgaggagaaggagtgggaggcactgagggcccagctgaccaccaggccacgt
gacctggagctggtggcacgacgcttccggagagacgagaactcagttcctcctacctac
gtcctgcaggcgacaggtggcagagaggctcctgggcctgaggaggccactctgacctct
gtccttcgctctggagctcaggaggcctggaggcggggcctcatcagccaggagcagtgg
caccgccaccaccggtcagtcatcgagtgggagatagagcggggcctgctgggctcagtg
gccggggagcagggcgccactgtcttccttcgagagatccaggacctcaacaagcacatc
ctggaggacggcgccctcaagatggtggaccggctcgcagacggctgcctggatactgac
gcccagaaccttctgagggacctcaaggggcgcatcactgacacacaccccggggtcctc
aagacccaccgcctgccgtggagccgagacctggtgaaccccaagaacaaggctcacgcc
cgctacctccgggagctgggagagcagtttgtggccagggctgaccaccaggtcctcaag
catctccgggagctggagctggccaggcaggacctggcctggctctaccaggagatccgc
caccacctctggcagagcgcagaggccaccgggaccttctgtggccgccgggagctgctg
gctcagctcgggcagcggctcagacgagacgacagccagccccacggccccgtggtcctc
ttcggccccccgggcgtcgggaagtctgccctgatgtgcaagctggctgagcagatgccc
gggctgctcggccacaagacggtgacggtcctgcggctgctggggacgtcgcagatgagc
tccgacgcctgcagcctcctgaagagcctctgcttccaagtgtgcctggctttcgggctg
cccccgccgcccccccaggtcctggaggcccaggccagggtggcccagctcctgcgcggc
ctcctccacaccgtctcccgcaggaacttcgagtccctggtgctgctgctggactccgtg
gacgacctggactctgtccgaggctcccggaggatcccctggctgcctctcaggtgtccc
ccgaaggtgcacctcatcctctcagcttgctcggggcagcggggggctctggacaccgtg
cggcggacggtcgcggaccccgaggcctactgggaggtgaggcccctctctgggaaccaa
ggacaagaaatgatccagctcctgttggtggcagcaaggaggaccctgagccccacgcag
cgggacctgctctgggccagccttccagactgcggtcacccagggcggctgaggctggct
tttgaggaggcccggaaatgggcctccttcaccgtgcccgtgcccttggcctccaccgcc
gaggaggcgacacaccagctctgtgcccgcctggagcagacgcacgggcagctcctggtg
gcccacgtgctgggttacatcgtgtcttcccggcacggtctctcggaggcggagttgaaa
gacgtcttgtccttggacgatgaggtgctgcaggtggtgtaccgggactggacccccccc
agcaaggagctgctgcgcttcccgcccctgctgtgggtgcggcttcgtcgggacctgggc
cactgcctggcccggagacccgcggacggcctcacactcctgggcatcgcccacagaatg
cgtgaccttgcacccaggcgccagctgccagcctctcttctcccccgccaggtggcccca
cagcccttgtggttctcggacacggtggcaaaccagcggaagctgaaggagctgccccac
cacctgctgcactcggggcgcctggaggagctgaagcaggaggtgctgggtagcatgagc
tggatctgctgccgcggcatctctgggggcatcgagagcctgctggatgactttgacatg
tgtgtccctcacgtggactcccccgaggtcggcctggtccgagaggccctccagctctgc
cgccctgccctggagctgcgaggcttgggtgagtccggctgcccagctgggggtctcttt
gcggcctggccagacctggccatgaacgtggattttgggccccatggtgtcagtggaaat
ctcggctctgccacttacggaagccaccactgtctcttttgcatggctgcaggtatcacc
gccatggcgtggagcctggaagagaaattgttggtggtcggcacccaggatggcctcgtg
gctgtgtgggacatggaggagcagcaggtggtccacattctaacaggacacacgggagag
gtgaggtgtgttaaagtttttgcagaagggattcttgccatctctgcctctaaggaccac
actctgcgcgtgtggaacttactttctggccaggagaaattttccatttgggatggaggc
tcaaaaaattccactgaaccccagatctggaaccttcatgtggatgaaacaaataaaatc
atgtattcaacctctggctccaagatccacgcgtggagtttagaaacggcggagctggtt
ttccgcatcctgggagacggtgccgatccctgggtgagcacggccgtgctgccttcccag
accaggctgctgaccgtgtccaggggcggcgaggtcactctgtggaactcggccacgggg
agcctgcaggggaagcaccgtttgtccagcatcaaagaggaggcccccacctgtgccgtc
tcggtccagacgcaaggcaaggtggtcactgggttcagcgacggctccgtctctttggtt
tcccctggaggagacaggttgctggagaagcttccagaagctgtgggattcctggtggtc
tctgaagacgagtcccttcttgctgcaggctttggaagatccgtgcgaatattcttggcc
gactcacagggctttcaccgtttcatgaccaacgacttggaacatgaggacgtggtagag
acagctgtttttggagctgagaacaacctgattgtcactgggtcccgggatgcactcatt
caggtgtggagtctgtcagagcaggggaccctgctggacgtcctggaaggtgtgggagcc
cctgcgagtctgctggtccgcggaggggccctggtggcctccgcctcccagcagtcctca
tccttcaaagtctgggacctcacctgcacgcagaggccccgggccttggctcccttcctg
gaccgcacggggctcactgctgtgtcccacaacggaagctacatctacttccccaaaatc
ggggacaaaaacaaagtcaccatttgggacgtggcagaaggtgaggagcaagattccctg
gacacgtccaacgaggtcaagtgtctggaggtcgccgagcaagcccagctgctgttcgcg
ggccttgtttccggaattgtccttgtgttccccctgaattcccggcaggacgtgatgtgc
atcccccctccagaggcccgcaaggccatcaactgcatgtccttgagcaagaacgaggac
cgtctggccattgcctatgacaacattgtcctggtgctggacatcagccctggagacccc
tgtcccgtcatcgatgggccgacatacaccttttatacccagctgcctgagaccatagcc
tgtgtggccgttttgactgattaccgtgtggtctacggcatgaccaatggcgacctgttt
ttgtacgagtgtgcaaattccaaggtgttccctttggaggcccacaggagccaagtcacc
tgcgtggaggtcagccaccaggaacagctggcggtcagcgggtctgaggaagccttgctg
tgtctctgggaactggaggcctgcaagtggaagttcaagatgagctacacgagttccttc
tgcagaggagtccagtgcgcttgcttctccaaggatgacaagtttgtgtacgtgggcttg
aaggaccgctccataattgtctggagcgtgctggatggcaccctgctggctgtccagttt
gtccatgcagtggtaaacagaatcatccccacctccaatggctttattgctcccacgaga
catggctatctcatccgagagcgtttccactgtccttcattaagagcctcacaggaggat
cccctcaagaacttcaagaaggcagtgtggatggtcaagtccaggcagagagaagagctg
gctgcagctgcagaaacaccccaggacttgacatcccagtcggcccagggaaacaaatcc
agatcaaacaaacattcacaagtctgcctgttggtgtga
DBGET
integrated database retrieval system
