Marmota marmota marmota (Alpine marmot): 107145268
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Entry
107145268 CDS
T09644
Symbol
Ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107145268 (Ddx39a)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107145268 (Ddx39a)
Spliceosome [BR:
mmma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107145268 (Ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107145268
NCBI-ProteinID:
XP_015344635
Ensembl:
ENSMMMG00000021991
UniProt:
A0A8C6A9V9
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaggatgtggagaacgagctcttggattatgaagaagatgaagagccccag
gctcctccagagagtactccagctccacctaagaaagacgtcaaggggtcctacgtctcc
atccatagctctggcttccgagactttttgctgaagccagagctcctgagggccatagtg
gactgtggttttgaacacccatccgaggtccagcatgagtgtatcccccaggccatcctg
ggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggctgtcttcgtgctg
gctactctgcagcagatcgagccagttaatggacaggtgacagtcctggtcatgtgccat
acgagggagttggccttccaaatcagcaaggagtatgagcgcttctccaaatacatgccc
agtgtcaaggtgtctgtgttctttgggggcctctccatcaagaaagatgaagaagtgttg
aagaagaattgtccccacgtagtggtggggacaccaggcaggatcctggccctcgtgcgg
aacaggagcctcaacttaaaaaacgtgaagcactttgtgttggacgagtgtgacaagatg
ctggagcagctggacatgcggcgggatgtgcaggagatcttccgcctaacgcctcatgag
aagcagtgcatgatgttcagtgccaccctgagcaaggagatccggccagtctgcaggaag
ttcatgcaggatcccatggaggtgtttgtggacgacgagaccaagctcacgctgcatggg
ctgcagcagtactatgtcaagctcaaggacagcgagaagaaccgaaagctctttgacctc
ctggatgtgctggagtttaaccaggtggtgatcttcgtcaaatccgtgcagcgctgcatg
gccctggcccagctccttgtggagcagaacttcccagccatcgccattcaccggggcatg
gcccaggaggagcgtctgtcacgctaccagcagttcaaggacttccagcggcggatcttg
gtggccaccaatctctttggccgagggatggatattgagcgcgtcaacatcgtcttcaac
tatgacatgcccgaggactcggacacctacctccaccgggtggcccgcgcaggtcgcttt
ggtaccaaaggcctggccatcacttttgtgtctgatgaaaatgatgccaaaattctcaat
gatgtccaggaccggtttgaagtgaatgtggctgagcttccggaagaaatcgatatctcc
acatacatcgagcagagccggtaa
DBGET
integrated database retrieval system
