KEGG   Marmota marmota marmota (Alpine marmot): 107145349
Entry
107145349         CDS       T09644                                 
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018  RNA degradation
mmma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107145349 (Lsm4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107145349 (Lsm4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107145349 (Lsm4)
   03041 Spliceosome [BR:mmma03041]
    107145349 (Lsm4)
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107145349 (Lsm4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107145349 (Lsm4)
Spliceosome [BR:mmma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107145349 (Lsm4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107145349
NCBI-ProteinID: XP_015344747
Ensembl: ENSMMMG00000001362
UniProt: A0A8C6EMF5
LinkDB
Position
Unknown
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttatcgctgctgaagacagctcagaaccaccccatgttggtggagctcaag
aatggggagacgtacaatgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgggaggtgatctgcacgtccagggatggggacaagttctggcggatgcccgagtgctac
attcgaggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccggggccgcggtggcttgcagcagcagaagcagcagaaa
ggccgcggcatggggggcgctgggcgaggtgtgtttggtggccggggccgaggcgggatc
cctggcacgggccgaggccaacctgaaaagaagccgggcaggcaggcgggcaagcagtga

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