Marmota marmota marmota (Alpine marmot): 107145661
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Entry
107145661 CDS
T09644
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04270
Vascular smooth muscle contraction
mmma04360
Axon guidance
mmma04611
Platelet activation
mmma04625
C-type lectin receptor signaling pathway
mmma04810
Regulation of actin cytoskeleton
mmma05135
Yersinia infection
mmma05152
Tuberculosis
mmma05163
Human cytomegalovirus infection
mmma05200
Pathways in cancer
mmma05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107145661 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
107145661 (Arhgef12)
04625 C-type lectin receptor signaling pathway
107145661 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
107145661 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
107145661 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107145661 (Arhgef12)
05205 Proteoglycans in cancer
107145661 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
107145661 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
107145661 (Arhgef12)
05152 Tuberculosis
107145661 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107145661 (Arhgef12)
Membrane trafficking [BR:
mmma04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107145661 (Arhgef12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
AAA_23
Motif
Other DBs
NCBI-GeneID:
107145661
NCBI-ProteinID:
XP_048651567
Ensembl:
ENSMMMG00000022179
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVIGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVIPSRPLGDALTGSEAEIEPGDGLGRTDWSTGDAS
RPSSDNADSPKSGMKERIYLEESPEKSEAIQDTDTQSLVWSPSTRVAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
IFLEFHQFFLDRSAHLKVSVPEEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQKHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVILEKERACAEQIVAKIEEVLLTAQAVEEEK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKPRHPKHLSTPSSVSPEPQDSAKVRPCGLANEGTDTGY
LPANSVSSVASGSTLSQEGGKENDIGSKQVGETPASGDSLDGTPRTPNTIFDFPPPALDQ
VQEEEFEVERVMEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLTWPYLEWPMEREKVKKAADHCRQILNYVNQA
VKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKMIHEGPLVWKVNRDKSID
LYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLNTVLVRQVATDNKAL
FVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTKPIPLQSPACEGDNDEEE
PPKLKVEQHGISVTGLQSPDRDLGLESPLISSKPQSHSLSISGKSEADDLFVTERQFAKE
QHTDGTLKESGENYQITIPDPHLPVSEERWALDALRNLGLLKQLLVQQLGLTEKNTQEDW
QRFPSYRITSQGVQADSEIQNSENTKAYPGEGQMPFRTGTGDIAACYSPRTSTESSAPRD
SVVLASQDSQASNILVMDHMIMTPEMPATEPEGGLDESGEHFFDAREAHSDDNPSEGDGA
VKKEEKDVNLRISGNCLILDGYETVQESSTDEEVASSFTLQPVTGIPSMDSTHHQQHSPQ
NAHSDGAGSPFTPEFLVQRRWGTMEDSCFDIQSPSSYTDSQSQIMEYIHKIEADLEHLKK
VEESYTILCQRLAGSALTDKHSDKS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtcgactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgaacgcagtgca
tcacatgactttgaccccacagatagttcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtaatcatccagaaagatgacaat
ggatttgggctgacagtcagtggagacaatccagtcttcgtacagtctgtgaaagaagat
ggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaggtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgccctcctgggtcgccccagattccacttgctgactctgaa
gtagaaccatcagtcattggacatatgtctcccatcatgacatcccctcactcacctgga
gcatctgggaatatggagcgaatcactagtcctgtgctcatgggggaagaaaataatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttgcagaaagaacaggaacggcta
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccaa
gaagccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttataccctccaggcctttaggtgatgccttaacaggcagtgag
gcagaaatagaacctggagatggactgggcaggacagactggagcactggagatgcatct
cggcctagtagtgacaatgcagatagtcccaagagtggcatgaaagagaggatttatcta
gaggaaagcccagagaaaagtgaagcaattcaggacactgacactcagtcacttgtttgg
agtccctcaacccgtgttgcacctcatataattggagcagaggatgatgattttggtact
gagcatgaacagatcaatgggcagtgcagctgtttccagagcattgagttgctaaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcccagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtacaaacagaccaattccaaagaaactcgtcgc
atctttcttgagtttcatcagttcttcctggatcgatctgcacatctgaaggtttctgtt
cctgaagaaatatctgtagatctagaaaagaggagacctgaacttattcctgaggatcta
catcgtcactatatccaaactatgcaagaaagagtccacccagaagttcagaagcattta
gaagattttcggcagaaacgtagtatgggactgaccttggctgaaagtgagctgactaaa
cttgatgcagagcgagacaaggaccgggtaattttggagaaggagcgggcatgtgcagaa
cagatcgttgccaaaattgaagaagtgttgttgactgctcaggctgtagaagaagaaaag
agttccacaatgcagtatgttattctcatgtatatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatctggagcacaagcggggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgaagaaaaagggaagcgaagaggattccctagcatt
ctaggacccccaaggagaccaagtcgtcatgacaatagtgcaattggcagggccatggaa
ctacagaagccacgccatcctaagcatttatccacaccttcatctgtgagtccggaaccc
caggactctgctaaggtgcggccatgtggcttagcaaatgaaggaacagacactggatac
cttcctgccaattccgtgtcctctgtggcttcagggtccactctttcccaagaaggaggg
aaagagaatgatataggatcaaaacaagttggagaaacaccagcatctggagactcattg
gatggcacacctcgtactcccaataccatctttgatttcccacctcctgcattagaccaa
gtgcaggaggaggagtttgaagtagaaagggtgatggaacatgggacaccaaagcccttt
agaaagtttgacagcatagcctttggagaaagtcaaagtgaggatgaacaatttgaaaat
gacctagagacagatccacccaactggcagcagcttgttagtagagaagtgttactggga
ctcaaaccttctgagatcaaaagacaggaagtgattaatgaattgttctacaccgagaga
gctcatgttcgaacattgaaggttcttgatcaagtattctatcagcgagtatccagagaa
ggaattctttcaccttcagaactacgaaagattttttcaaacttggaagatattcttcaa
cttcatgttgggctgaatgaacaaatgaaggctgttcgaaagaggaatgagacctctgtt
attgatcacattggggaagatctgttgacctggccatatttagaatggccaatggaaaga
gagaaggtgaagaaagctgctgatcactgtcgtcagatcttaaattatgtaaatcaggct
gtcaaggaggcagaaaacaaacagcgcttagaagattatcagcgtcgccttgatacctcc
aatctgaagttatcagagtatccaaatgttgaagagctcaggaatttggatttaacaaaa
aggaagatgattcatgaaggaccattggtttggaaggtgaatagagacaaaagtattgat
ctgtacacattgctgctggaggacattcttgttttgttacaaaaacaggatgataggctg
gtgttaaggtgtcatagtaagattctggcatctacagctgatagcaaacacacatttagt
cctgtcattaagttgaatacagtgttggttcgacaagtggcaacggacaacaaagcttta
tttgtcatctccatgtcagacaacggagcccaaatttatgaattggtggcacagacagtc
tctgaaaagactgtctggcaggacctaatctgtcgaatggctgcatcagtgaaggagcaa
tccacaaagccaattccattacagtcaccagcttgcgaaggagataatgatgaagaagaa
ccaccaaaattaaaagtagaacagcatggcatttcagtcactggtctacaaagtccagac
agagatttgggattagagtctcccttaatatcatcaaaacctcagtctcattcactgagt
atctctgggaaatcagaggcagatgatctttttgtgactgagagacagtttgcaaaggaa
cagcatacagatgggacactaaaggaaagtggagaaaattatcaaataacaatcccagat
ccacacttgcctgtctcagaagaacggtgggcattggatgcactaaggaatttgggtctg
ttgaagcagttgctggtacagcagctaggtttgactgagaagaacactcaggaagactgg
cagcgtttcccaagttacaggataacctctcagggggtgcaggcagatagtgaaatccag
aactctgaaaatacaaaggcttatcctggtgaaggacagatgccctttagaactggaact
ggtgacattgcagcttgttacagtccacggacttcaactgaatcttctgctccacgggat
tcagtggtactggcatcccaagatagccaggcaagtaacattttagtaatggaccacatg
attatgaccccagagatgcctgccacagagccagaagggggtcttgatgagagtggagag
cacttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagca
gttaaaaaggaggagaaggatgttaatttacgcatctcaggaaactgtttgatccttgat
ggctatgaaacggtgcaggagagctccacagatgaggaggttgcttcctcatttaccctg
cagcctgtgacaggcatcccttctatggactccactcaccatcagcagcattctccccag
aatgctcattctgatggggcaggttcgccattcaccccagaattcctggtccagcggcgc
tggggaactatggaagattcctgttttgatatccagagcccctcctcttatacagattca
caaagccagatcatggagtacattcataagatagaggctgaccttgaacacttaaagaag
gtggaagaaagttataccattctttgccaaaggctggctggatcagccctcacagacaag
cactcagataaaagttaa
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integrated database retrieval system
