Marmota marmota marmota (Alpine marmot): 107145674
Help
Entry
107145674 CDS
T09644
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107145674 (Dscaml1)
Cell adhesion molecules [BR:
mmma04515
]
Immunoglobulin superfamily
Other
107145674 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
Adeno_E3_CR1
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
107145674
NCBI-ProteinID:
XP_015345150
Ensembl:
ENSMMMG00000022804
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITHHGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGRTVELPCTASGYPIPA
IRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGLLTVVEPLH
VTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPDEAISIRGLNNETLLITSA
QKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIASSFSEKVVNPGERFSLMCAAKGAPP
PTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFEN
GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGHSKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKLKP
ADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKE
LTVSTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRG
MEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTK
PNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNS
SEKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSM
DGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSA
SSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLA
AKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLE
YRPKGTWAWQGLRANSSTEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTI
PPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVNPQ
SFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKP
QDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPCPVVPPREASIRNLART
YHTQARHLTLDPASKPLGLPHPGAPAAATTATLPQRTLAMPAPPAGTAPPAPGTTPAEPP
TASSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggccgtcttcaagtgcctcatcccctcttcagtgcaggaatacgtt
agcgttgtgtcttgggagaaagacacagtttccatcatcccagaaaacaggttttttatt
actcaccacggcgggctgtacatctcggacgtgcaaaaagaggacgccctgtccacctac
cgctgcatcaccaagcacaagtacagcggggagacgcggcagagcaacggggcccgcctc
tccgtgacagaccctgctgagtctatccccaccatcctggatggcttccactcccaggaa
gtgtgggctggccgcaccgtggagctgccctgcaccgcctctggctaccccatccctgcc
attcgctggctcaaggacggccggcccctccccgccgatagccgctggaccaaacgcatt
acagggctgaccatcagtgacctgcggaccgaggacagcggtacctatatatgtgaagtc
accaacaccttcggttcagcagaggccacaggcctcctcacagtcgtcgaaccccttcat
gtgaccctgacaccaaagaaactgaagaccggcatcggcagcacggtcatcctctcctgt
gccctgacggggtccccggagttcaccatccgctggtaccgcaacaccgagctggtgctt
cccgacgaggccatctccatccgcgggctcaataacgagactctgctcatcacctcggcc
cagaagagccattccggggcctaccagtgcttcgccacgcgcaaggcccagaccgcacag
gacttcgccatcatcgtgctggaggacggcacaccccgcatcgcctcgtccttcagcgag
aaggtggtcaaccccggggagcggttctcgctgatgtgtgcagctaagggcgccccgccc
cccacggtcacctgggccctggacgacgagcccatcgtgcgggatggaagccaccgcacc
aaccagtacaccatgtccgatggcaccaccatcagccacatgaacgtcacaggcccccag
atccgcgacgggggcgtgtaccggtgcacggctcggaactcggtgggcagtgctgaatat
caggcgcgaataaacgtaagaggaccccccagcatccgggcaatgaggaacatcacagca
gtcgccgggcgggacaccctcatcaactgcagggtcatcggttacccctactactccatc
aagtggtacaaggatgccctgctgctgccggacaaccaccgccaggtggtatttgagaac
gggaccctcaagctgactgacgtgcagaagggcatggacgaaggggagtacctgtgcagc
gtcctcatccagccccagctgtccatcagccagagtgtccacgtggctgtcaaagtgccc
cctctgatccagcccttcgagttcccaccggcctccatcggtcagctgctctacatcccc
tgtgtggtgtcttcgggggacatgcccatccgcatcacctggaggaaggacggacaggtg
atcatctcaggctcgggcgtgaccattgagagcaaggagttcatgagctccctgcagatc
tccagtgtctccctcaagcacaacggcaactacacatgcatcgccagcaacgcggcagcc
accgtgagcagggagcgccagctcatcgtgcgtgtgccccctcgatttgtggtgcagccc
aacaaccaggatggcatctatggcaaagctggtgtgctcaactgttcggtggatggctac
ccaccacccaaggtcatgtggaagcatgccaaggggagtgggaacccccagcagtaccac
ccagtgcccctcaccggccgcatccagatcctgcccaacagctccctgctgatccgccac
gtcctagaagaggacatcggttactacctctgccaggccagcaacggcgtgggcaccgac
atcagcaagtccatgttcctcactgtcaagatcccagccatgatcacctcccaccccaac
accaccatcgccatcaagggccactccaaggagctgaactgcaccgcgcgtggcgagcgg
ccaatcatcatccgctgggagaaaggggacactgtcattgaccccgacagagtcatgcgc
tatgccatagccaccaaggacaatggcgatgaggttgtctccacgttgaagctcaagcca
gctgaccgtggggactctgtgttcttcagttgccacgccatcaactcgtacggggaggac
aggggcttgatccagctcaccgtgcaagagccccctgacccccctgagctggagatccgg
gaggtgaaggcccggagcatgaacctgcgatggacccagcgattcgatgggaacagcatc
attacaggctttgacattgaatacaagaacaaatcagattcctgggacttcaagcagtcg
acacgcaacatctcccccaccatcaatcaggccaacatcgtggacctgcacccagcgtcc
gtgtacagcattcgcatgtactccttcaacaagattggccgcagcgagccaagcaaggag
ctcaccgtcagcactgaggaggctgctcctgatgggccccccatggatgtcaccttgcag
ccagtgacctcacagagcatccaagtgacctggaaggcacccaagaaggagctgcagaat
ggcgtcatccggggctaccagatcggctacagagagaacagccctggcagcaacgggcag
tacagcatcgtggagatgaaggccacaggcgacagcgaggtctacaccctagacaacctc
aagaagttcgcccaatatggggtggtggtccaggccttcaaccgggccggcacggggccc
tcttccagcgagatcaacgccaccaccctggaggatgtgcccagccagcccccggagaat
gtccgggccctgtccatcacctctgacgtggctgtcatctcctggtcagagcccccacgc
agcaccctcaatggtgtcctcaaaggctatcgggtcatcttctggtcactctatgttgat
ggagagtggggtgagatgcagaacatcaccacgacgcgggaacgggtggagctacggggc
atggagaagttcaccaactacagcgtccaggtgctggcctacactcaggctggggacggt
gtgcgcagcagcgtgctctacatccagaccaaggaagacgttccaggtcccccagctggc
atcaaagctgtcccttcatcggctagcagtgtggtcgtttcttggctccctccaaccaag
cccaatggcgtgatccgcaagtacaccatcttctgctccagcccggggtctggtcagccg
gctcccagtgagtacgagacgagcccagagcagctcttctaccgcatcgcccacctgaac
cgtgggcagcagtacctgctgtgggtggctgctgtcacctccgccggcagggggaacagc
agcgagaaggtcaccatcgagcctgctggcaaggccccagcaaagatcatctcatttggg
ggcaccgtgacaacaccctggatgagagatgtccggctgccttgcaattcagtgggagat
ccagcccctgctgtgaagtggaccaaggacagtgaagactcggccatccccgtgtccatg
gatgggcaccggctcatccacacaaatggcacactgctgctacgtgctgtgaaggctgag
gactccggctattacacctgcacagccaccaacaccggtggcttcgacaccatcatcgtc
aaccttctggtgcaagttcccccagaccagccacgcctcactgtctccaaaacctcagct
tcatccatcactctgacctggattccaggtgacaatgggggcagctccatccgaggcttc
gtgctccagtattcagtggacaacagcgaggagtggaaggacgtgttcatcagctccagc
gagcggtcctttaagctggacagcctcaagtgtggcacatggtacaaggtgaagctggcg
gccaagaacagcgtgggctctgggcgcatcagcgagatcatcgaggccaagacccatggg
cgggagccctccttcagcaaagaccaacacctcttcacccacatcaactccacgcatgct
cggcttaacctgcagggctggaacaacgggggctgccccatcacggccatcgtactggag
taccggcccaaagggacctgggcctggcagggcctccgggccaacagctccacagaggtg
tttctgactgaactgcgggaggccacgtggtacgagctgcgcatgcgggcttgcaacagc
gcgggctgcggcaacgagacagcccagtttgccaccctggactacgatggcagcaccatc
ccacccatcaagtctgctcaaggtgaaggggacgatgtgaagaagctgttcaccattggc
tgcccagtcatcctggccacactgggggtggccctgctcttcattgtccgcaagaagagg
aaggagaagcggctgaagcggctccgagatgcaaagagtttggcagaaatgctgataagc
aagaacaaccgaagctttgacacccctgtgaaagggccgccccagggcccacggctacac
attgacatccctagggtccagctgctcattgaggacaaggagggcatcaaacagctagga
gatgataaggccaccatccccgtgacggatgctgagtttagccaggctgtcaacccacag
agcttctgtacaggtgtctcgctgcaccacccagccctcatccagagcacaggacccctc
atcgacatgtcggacatccggccaggaaccaatccagtgtccaggaagaatgtgaagtca
gcccacagcacccggaaccggtactccagccagtggaccttgaccaagtgccaggcctcc
acacctgcccgcaccctcacctctgactggcgcactgtgggttcccagcatggtgtcact
gtcacagagagtgacagctacagcgccagtctgtcccaggacacagacaaaggacggaac
agcatggtgtccactgagagtgcctcctccacctacgaggagctggcccgggcctacgag
catgccaagctggaggagcagctgcagcacgccaagttcgagatcaccgagtgcttcatc
tccgacagctcctctgaccagatgaccacaggcactaacgagaacgcagacagcatgacg
tccatgagcacaccctcagagcctggcatctgccgctttaccgcctccccacccaagccc
caggatgctgaccggggcaaaaatgtggctgtgcccatccctcaccgggccaacaagagt
gactactgcaacctgcccttgtatgccaagtcggaggccttcttccgaaaggctgacggg
cgtgagccctgccctgtggtcccaccccgagaggcctccatcaggaacctggctcgaacc
tatcacacgcaggctcgccacctgaccctggaccctgccagcaagcccttgggcctccca
cacccaggggcccctgctgctgccaccacagccaccttacctcagaggactctggccatg
ccagcccccccagctggcacggctcccccagcgcccggaaccacccctgccgagcccccc
actgcctccagcgctgccccaccggcccccagcaccgagcctccgcgggccgggggccca
cacaccaaaatggggggctccagggactcactcctcgagatgagcacctcaggggtaggg
cggtcacagaagcagggggccggggcctactccaagtcctacaccctggtgtag
DBGET
integrated database retrieval system
