Marmota marmota marmota (Alpine marmot): 107145880
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Entry
107145880 CDS
T09644
Symbol
Ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmma03009
]
107145880 (Ddx10)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107145880 (Ddx10)
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
90S particles
Helicases
107145880 (Ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
DUF2390
Motif
Other DBs
NCBI-GeneID:
107145880
NCBI-ProteinID:
XP_048651686
Ensembl:
ENSMMMG00000000319
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MRLGASSPCWFCELCRTSTWSLGISCLSSVQAVAAATMGKTADSLSQGTRSDPVRSFNRW
KKKHSHRQNQKKQLRKQLKKPEWQVEREGISRLIQNYEKINVNEITRFSDFPLSKKTLKG
LQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLG
VLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQ
HMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDL
ARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSC
KEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPA
VNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKI
NPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKLPIPEYALSL
GLAVAPRVRFLQKMQKQSTKELVKSQGNVVTGPRAPSLTNDEVEEFRAYFNEKMSILQKG
GKRLQGTENRQNSDVSEEEEEEEEEEEEDEEEEEEEEGEEGEEEEMKEKLGKAKGSQTQS
HPNMETQKVKEVSVLFLDQHDEEEDGPDNDFLTVKRCNVFGLNLSENEVLQKKEPSKSSV
KKKVTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSTMNDKEEDDDTGGINLDK
AKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKEEEEAFLDWSDDDD
DGFDPSTLPDPDKYRSSEESDSEDMENKISDTKKKQEMKKRNNSELEDVGPTSHHRKKAK
WETLEPLDTGLSLAEDEELVLHLLKNQS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcggtgcgtcttccccatgctggttctgtgaactctgccgcacctccacctgg
tctttagggatctcgtgtttgagctctgtccaggctgtagccgccgccacgatgggcaaa
actgctgactctctgagtcagggaacccgatccgacccggtgcggagcttcaatcgctgg
aagaaaaaacacagccataggcagaaccaaaagaagcagttgaggaagcagctgaagaag
cccgagtggcaggtcgaacgtgaaggcatcagccgacttatacagaactatgagaagata
aatgtaaatgaaattacaagattttcagatttccccttgtctaaaaaaacattgaaaggt
ttgcaagaagcccagtaccgcttggtaactgagatacagaagcagaccatagggttggct
ttgcaaggtaaagatgtacttggagctgccaaaactggatctggcaagactttggctttt
cttgttccagtgttggaagccttataccgtctgcagtggacctcaactgatgggctgggt
gttctgataatatcacctacacgagaactggcatatcagacctttgaggttctccgaaaa
gtaggaaagaaccatgacttctcagctggtctcatcattggtggaaaggatctgaaacat
gaagctgagaggatcaacaacataaatatactcgtttgcacaccaggtcggcttctgcaa
cacatggatgaaacaatatgttttcatgccaccaatctccaaatgttagttcttgatgaa
gcagacagaatattggatatgggctttgctgatactatgaatgctattattgaaaatctt
cccaagaaacgtcagactttacttttctcagcaacacaaactaaatctgtaaaggacctt
gcacgcttgagcttgaaaaaccctgaatatgtatgggttcatgaaaaagcaaaatacagc
acccctgctactttggaacagaactacatagtttgtgagctgcagcaaaaaataagtgtg
ctgtattcctttttgagaagtcatctgaagaagaagagtattgtgtttttctctagttgc
aaagaggttcagtacctgtaccgagttttctgtcggcttcgccctggtatttctatcctt
gctctccatggtcgacaacaacagatgagaagaatggaagtctataatgaatttgtccgc
aagagagctgcagtactctttgctacggatattgcagccagggggctggattttccagct
gtaaattgggttcttcagtttgattgtccagaggatgccaacacatatattcacagagca
ggtagaactgccaggtacaaagaggatggtgaagccttattaattttgcttccctcagaa
gaaaaagggatggtgcagcaacttctccagaaaaaagtacctgtaaaggaaatcaaaatc
aatccagaaaaacttatagatgtacagaaaaaattggaatcttttttagcccaagatcaa
gatttaaaagaaagagctcaaaggtgttttgtctcctacatacgttcagtataccttatg
aaggataaagaagtattcgatgtgaacaagttacctattcctgaatatgcactgtctctt
ggtcttgctgtggcaccacgggtaagatttcttcagaaaatgcagaaacaatctaccaaa
gaattggtgaagagtcaaggcaatgtggtaactgggcccagggctccatctctcaccaat
gatgaggtggaagaatttagagcctatttcaatgagaagatgtccatccttcagaaaggt
gggaaaagactacaagggacagagaatagacagaatagtgatgttagtgaagaggaggag
gaggaggaggaggaggaggaggaggatgaagaagaagaagaagaagaagaaggagaagaa
ggagaagaagaagaaatgaaagagaaactgggaaaagcaaaagggtctcaaactcaatct
catcccaacatggagacacagaaggtcaaggaagtttctgtgctgttcttggaccaacat
gatgaggaagaagatggacctgataatgattttcttacagtgaaacggtgcaatgtgttt
gggttgaatctttcagagaatgaagtgttacagaagaaagaaccttctaaatccagtgtc
aagaaaaaagtaaccaaagtggcagaagcaaaaaaagtaatgaagagaaattttaaagtg
aataagaaaataacatttactgatgaaggggagttggttcagcagtggccacagatgcag
aaatccaccatgaatgataaggaggaggatgatgacactggtggtatcaacttagataaa
gcaaaggaaaggcttcaggaagaggacaaatttgacaaagaagaatataggaagaaaatt
aaggcaaagcatcgggagaagagactgaaagaaagggaagccagaagagaagccaacaag
agacaagcaaaggccaaagaggaagaggaagcttttctggattggagtgatgatgatgat
gatggatttgatccaagcacacttccagatccagataaatacagaagctctgaagaatca
gatagtgaagacatggaaaataaaattagtgataccaagaagaagcaggaaatgaagaaa
aggaacaacagtgaattggaagatgtgggaccaacaagtcatcatagaaagaaggccaag
tgggaaaccttagaacctttggatacaggcctgtctttagcagaggatgaagagctggtg
ttacatctactcaaaaatcaaagctaa
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