Marmota marmota marmota (Alpine marmot): 107145894
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Entry
107145894 CDS
T09644
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04066
HIF-1 signaling pathway
mmma04137
Mitophagy - animal
mmma04140
Autophagy - animal
mmma04148
Efferocytosis
mmma04659
Th17 cell differentiation
mmma04919
Thyroid hormone signaling pathway
mmma05167
Kaposi sarcoma-associated herpesvirus infection
mmma05200
Pathways in cancer
mmma05205
Proteoglycans in cancer
mmma05208
Chemical carcinogenesis - reactive oxygen species
mmma05211
Renal cell carcinoma
mmma05230
Central carbon metabolism in cancer
mmma05231
Choline metabolism in cancer
mmma05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
107145894 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107145894 (Hif1a)
04137 Mitophagy - animal
107145894 (Hif1a)
04148 Efferocytosis
107145894 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
107145894 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
107145894 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107145894 (Hif1a)
05205 Proteoglycans in cancer
107145894 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
107145894 (Hif1a)
05230 Central carbon metabolism in cancer
107145894 (Hif1a)
05231 Choline metabolism in cancer
107145894 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
107145894 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
107145894 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
107145894 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107145894 (Hif1a)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107145894 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
107145894
NCBI-ProteinID:
XP_015345418
Ensembl:
ENSMMMG00000020603
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MEGAGGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDPE
TEDQQLEEVPLYNDVMFPSSSEKLQNINLAMSPLPASETPKPLRSSADPALNQEVVLKLE
PNPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQSVSTISVF
QQTQIQEPTINTTTATTDELKTVTKDDMEDIKILITSSSPTHAPKETTSATTSSYNDTQS
RTASPNRAGKGVIEQTEKSHPRSPNVVSVTLSQRNTVPEEELNPKILAFQNAQRKRKMEH
DGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLG
QSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggaggcgcgaacgacaagaaaaataggataagttctgaacgtcgaaaa
gaaaagtctagagatgcagccagatctcgacgaagcaaagagtctgaagttttttatgaa
cttgctcatcagttgccacttccccataacgtgagctcacatcttgataaggcttctgtt
atgaggcttaccatcagttatttgcgtgtgaggaaacttctggatgctggtgacctggat
attgaagatgaaatgaaggcacagatgaactgcttttatttgaaagccctggatggcttt
gttatggtgctcacagatgatggcgacatgatttacatttctgataacgtgaacaaatac
atgggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaaaagggtaaa
gaacaaaacacacaacgaagcttttttctcagaatgaagtgtaccctgactagtcgggga
agaactatgaacataaagtctgcaacatggaaggtacttcactgtacaggccatattcac
gtatatgataccaacagtaaccaatctcagtgtggatacaagaaaccaccaatgacatgc
ctggtattgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagtctggatatgaaattttcttattgtgatgaaagaatt
actgaattgatgggatatgagccagaggaacttttgggccgctcaatttatgaatattat
catgctttggactctgatcatctgactaaaactcatcacgacatgtttactaaaggacaa
gtcaccacaggacagtataggatgcttgccaaaagaggtggatatgtctgggtagaaact
caagcaactgttatatataacaccaagaactctcaaccacaatgcattgtatgtgtaaat
tatgttgtaagtggtattattcagcatgacttgattttctcccttcaacaaaccgaatgt
gtcctcaaaccagttgagtcttcagatatgaaaatgactcagctcttcaccaaagttgaa
tcagaggatacaagtagcctctttgataaacttaagaaggaacctgatgctttaactttg
ctggccccagctgctggagacacaatcatatctttagattttggcagcaatgacccagaa
actgaagaccaacaacttgaagaagttccactgtataatgatgtaatgttcccctcatcc
agtgagaaattacaaaatataaatctggccatgtctccattacctgcctctgaaactcca
aagccacttcgaagtagtgctgacccagcactcaatcaagaagttgtattaaaattagag
ccaaatccagagtcactggaactttcttttaccatgccccagattcaagatcaaccagcc
agtccttctgatggaagcactagacagagttcacctgagcctaacagtcccagtgaatac
tgttttgacgtggatagtgatatggtcaatgtattcaagttggaattggtagagaaactt
tttgctgaagacacagaagcaaagaatccattttcaactcaggacactgatttagacttg
gagatgttggccccctatatcccaatggatgatgatttccagttacgttccttcgatcag
ctgtcaccattagaaagcagttcttcaagccctcaaagtgtgagcacaatttcagtattc
cagcagactcaaattcaagaacctactattaataccaccactgccaccactgatgaatta
aaaacagtgacaaaagatgatatggaagacattaaaatactgattacatcttcgtctccc
acccatgcacctaaagaaactactagtgccacaacatcatcatataatgatactcaaagt
cgaaccgcctcaccaaacagagcaggaaaaggagtcatagaacagacagaaaaatctcat
ccaagaagccctaacgtggtatctgtcactttgagtcaaagaaatacagttcctgaggaa
gaattaaatccaaagatattagcttttcagaatgctcagagaaagcgaaaaatggaacac
gatggttcactttttcaagcagtaggaattggcacactattacagcaaccagatgatcgt
gcaactactacatcactttcttggaaacgtgtaaaaggatgcaaatctagtgaacagaat
ggaatggagcaaaagacaattattttaataccctctgatttagcatgtagactgctgggg
caatcaatggatgagagtggattaccacagctgaccagttatgattgtgaagttaacgct
cctatacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggatcaa
gttaactga
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