Marmota marmota marmota (Alpine marmot): 107146190
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Entry
107146190 CDS
T09644
Symbol
Vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04140
Autophagy - animal
mmma04148
Efferocytosis
mmma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107146190 (Vps41)
04148 Efferocytosis
107146190 (Vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107146190 (Vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107146190 (Vps41)
Membrane trafficking [BR:
mmma04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107146190 (Vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
zf_RING_Vps8_fungal
WD40_WDHD1_1st
Beta-prop_HPS5
Vps39_1
Beta-prop_RIG_2nd
zf_RING_Vps8
TPR_PEP5_VPS11
zf-RING_5
Frtz
RIG-I_C
Beta-prop_IFT140_2nd
CofB_pilin_dom
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107146190
NCBI-ProteinID:
XP_015345724
Ensembl:
ENSMMMG00000011922
UniProt:
A0A8C5ZDT5
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFHISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILDIGLAYINHLVERGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAVSPYLPRGDPVLKPLIYEMVLHEFLESDYEGFATLI
QEWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPTDAAKPFSVVVFHCRHMFHKECLPVPSMNSPAQYCNICSA
KNRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaagagcaggaaactgggtctcttgaagaatctaccgatgagtctgag
gaagaagagagtgaagaggaacccaaactgaagtatgaaaggctttccaatggggtaact
gaaattcttcagaaggatgcagctagctgcatgacagtccatgataagtttttggcactg
ggcacacattatggcaaggtttatttacttgatgtccagggaaacatcactcagaagttt
gatgtaagtccagtgaagataaatcagattagcctggatgaaagcggagaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtatttggattatattctggagaagaatttcat
gagacttttgactgtcctattaaaatcattgctgtacacccacattttgtgagatccagt
tgcaagcagtttgtgactggagggaagaagttgctgctctttgaacggtcctggatgaac
agatggaagtcttcggttctgcatgaaggggaagggaacatacggagtgtgaaatggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacattacctcaaaa
caaagaatcaccaatgtgccccgggatgatataagtcttcgcccagatatgtatccctgc
agcctctgctggaaggacaatgtgacactgattattggctggggaacttctgtcaagata
tgctcagtgaaggaacggcatgccagtgaaatgagggatttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattccacatcagtggactcgctcctctctgtgatcag
cttgttgtactttcctacgtaaaagaggtttcagaaaaaacggaaagagaatattgtgcc
agacctagattggatatcatccagccactttctgagacttgtgaagagatctcttctgat
gctttgacagtcagaggttttcaggagaatgaatgtagagattatcatttagaatactct
gaaggggaatcactcttctacatcgtgagtccaagagatgttgtagtagccaaggaacga
gaccaagatgatcacatcgactggctccttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaggaacataaaaagacataagattctggatatcggcttggca
tatataaatcacttggtggagagaggagaatatgacatagcagcacgcaaatgccagaaa
atccttgggaaaaacgcagccctctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggctgttagtccttatttgccaagaggagatccagttctgaagccactcata
tatgaaatggtcttacatgagtttttggaaagtgattatgagggttttgccacactgatc
caagaatggcctggagatctgtacaacaattcagtaatagttcaagcagttcgagaccac
ctgaagaaagatagtcagaacaagactttactcaaaaccctggctgaattgtatacctat
gacaaaaactatggcaatgctctggaaatatacttaacattaagacataaagacgttttc
caactgatacacaagcataatcttttcagttcaatcaaggataaaatagttttattaatg
gattttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtagtggaagaattagaagacagaccggagttacagcatgtgtatttgcataaa
ctcttcaagagagaccatcataaagggcagcgctaccatgagaaacagatcagtctttat
gctgaatatgatcgaccaaacttactaccttttctccgagatagtacccattgcccactt
gaaaaggctcttgagatctgtcagcagagaaactttgtagaagagacagtgtatcttcta
agcaggatgggcaatagccgaagtgccttgaagatgattatggaggagttgcatgatgtt
gataaagcaattgaatttgccaaggagcaagatgatggagaactctgggaagatctaatt
ttatattccattgacaaaccaccatttattactggcttgttaaacaatattggcacccat
gttgatccaattctgctgattcaccgtattaaggaaggaatggagattcccaatctgaga
gattccttagttaaaatattgcaagactacaatttgcaaattctgcttcgtgaaggctgc
aagaagattctcgtagccgactccttgtccttactgaagaaaatgcaccgaactcaaatg
aaaggtgttctggttgatgaggagaatatctgtgagtcgtgtctttcccccatccttcct
actgatgcagcgaagcccttcagtgtggtagtcttccattgccggcacatgttccacaaa
gagtgcttgcctgtccctagcatgaactctcctgcacaatactgcaacatctgcagcgca
aagaaccgtggaccaggaagtgcaattttggagatgaaaaaatag
DBGET
integrated database retrieval system
