Marmota marmota marmota (Alpine marmot): 107146308
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Entry
107146308 CDS
T09644
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107146308 (Irx1)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107146308 (Irx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PEP-CTERM
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
107146308
NCBI-ProteinID:
XP_048670152
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MALLGAEVPAGFDLRLWLPGAASRRGSSLSFVRHAFASLSGSPHSSQVALRRSDRDAGGV
QRPWISALRSSLALPSRISLESPASTLIASLIGLLQRSMIGGRRAKNGHFERPEARAEAP
LRISLTGLRCQGEEELGVGPXAAAVTSVLGMYAAAGPYAGAPNYSAFLPYAADLSLFSQM
GSQYELKDNPGVHPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQEDGTLFGSDTEG
DPEKAEDDEEIDLESIDIDKIDEHDGDQSNEDEEDKAEAPRAPAAPAALARDQGSPLAAA
DVLKPPDSPLGLAKDVPEPGSTRLLSPGAAAVGLQGAPHSKPKIWSLAETATSPDGAPKA
SPPPPTGHPGAHGPPTGAPLQHPAFLPSHGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFL
GVGAPHAAPHGPHLPAPPPPQPPVTVATGALHVDKASARSSPALPERDLIPRPDSPAQPL
KSPFQPVRENSLAPQEGTPRILAALPSA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctgggcgcagaagtccccgctggctttgatctgcggctctggctgccggga
gctgccagtcggcgtggcagctcgctttcatttgtcagacacgcgtttgccagtctttcc
gggtcgccccactccagccaggtcgctctgcgccgctccgaccgggatgcgggcggtgta
cagcggccctggatctctgccctccgaagctccctggcgcttccttccaggatctccctg
gagtcacccgcctccactctaatcgccagcctgattgggctccttcagcggtccatgatt
ggcggccgccgagcaaagaatggccattttgaaaggcccgaggccagggcagaggcgcct
ctgcgcatctccctgactggtctgcgctgccagggggaggaggagctgggggtcggacct
gnngcggccgcagtcacctcggtgctgggcatgtacgccgcggccggaccttacgctggc
gcgcccaactacagcgccttcctgccctacgccgcggatctcagcctcttctcgcagatg
ggctcgcagtatgaactcaaggacaaccctggggtgcaccccgccaccttcgcagcccac
acagcaccagcctattacccctacggccagttccaatatggggaccccgggcggcccaag
aacgccacgcgcgagagcaccagcacgctcaaggcctggctgaacgagcaccgcaagaac
ccgtaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacg
caggtctccacctggttcgccaacgcgcgccggcgcctcaagaaggagaacaaggttacg
tggggtgcgcgcagcaaggaccaggaggacggtaccctctttggtagcgacactgagggt
gaccccgagaaagccgaggacgatgaagagatagacctggagagcattgacattgacaag
attgacgaacatgatggcgaccagagcaacgaggacgaggaggacaaggcagaggcgcct
cgagcgcccgccgctcctgctgcgcttgctcgggatcagggctcgccgctagcagctgcc
gacgtgctcaagcccccagactcgcccttgggtctggccaaggatgtcccagaacctgga
agcactcgccttctgagccctggcgccgcggcagtcggcctgcagggcgcgccgcacagc
aagcccaagatctggtcgctggctgagacagccaccagccccgacggcgcgcccaaggcg
tctccgccgccgcccacgggccatccgggtgcccatgggcctcccaccggtgcgccgctg
caacaccccgcttttctgcctagccacggactgtacacctgccacatcggcaagttctcc
aactggaccaatggtgcgttcctagcacagggctcgctgctgaacatgcgttccttcctg
ggcgtcggagcgccccacgccgcgccccatgggccgcacctgccagcgccaccaccgccg
cagccacccgtcactgttgccaccggggcgctccacgtcgacaaggcctcggcccgtagc
agccctgcgctcccagagagagacctcattcctaggccggattcgcccgcacaaccgtta
aaatcgcccttccagccggtacgagaaaactcgctggccccgcaggagggaacgccgcgg
atcctagcagcgctcccgtctgcctga
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