Marmota marmota marmota (Alpine marmot): 107146468
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Entry
107146468 CDS
T09644
Symbol
Msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107146468 (Msh4)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107146468 (Msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
ATPase_2
nSTAND3
AAA_28
AAA_21
Motif
Other DBs
NCBI-GeneID:
107146468
NCBI-ProteinID:
XP_015346059
Ensembl:
ENSMMMG00000000736
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MLRPTTPASASEASPLPGGVHPRCPRGPRYAFELMKTPQSRPSAQALESSTPPGTSGAAG
DRSCSSSLPHQPPSSLPAPGSHFGNKRSHTPNPVATNFGTSSSSLQETYPQILKTPLSAG
NPQKSGYKSWTPQIGYSATSSSVSAHAPSVIVAVVEGRGLARGEIGMASVDLKSPQIILS
QFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFSTIQRKYFN
ETKGLEYIEQLCITEFSTVLLEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQGS
EQTAMIDSSSAQNLELLINNQDCRNNHTLFGVLNYTKTPGGSRRLRSNILEPLVDIETIN
MRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYLKH
TLELVDPLKITLKNCNTPLLRAYCGSLEDKRFEIILEKIKTVINDDARYMKGCLNMRTQK
CYAVRSHINEFLDIARRTYTEIVDDIAGMVTQLAEKYSLPLRTSFSSARGFFIQMTTDCT
VLPTDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEH
IHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISVEKPVANN
TYITEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAEQIFTRISTD
DDIETNSSTFMKEMKEIAYILHNANDKSLIIIDELGRGTNTEEGIGICYAVCEYLLSLKA
FTLFATHFLELCHIDVLYPNVENMHFEVQHVKNASRNKEAILYTYKLSKGLTEEKNYGLK
AAEVSSLPQSIVMDAKEITTQIARQILQHQRSTPEMERQRAVYHLATRLVQTARNSQLDP
DSLRMYLNNLKKKYEEDLCKAEQVPGKTEE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacctactacccccgcttccgcttctgaggcttcccccttacccggaggggtt
cacccgcggtgtccccgaggtccccgctacgctttcgaacttatgaagacgcctcagagc
cgcccttccgctcaggccttggagtcctctactcctcccggcacttcaggagccgcgggg
gatcgcagctgcagcagcagcctccctcaccagccgccaagctctctgccagccccaggt
tcacactttggaaacaaaagatctcacacaccaaaccccgttgcaacaaattttggtaca
agctcatcttctttacaggaaacttatcctcaaatacttaaaactccattgtctgctgga
aatccccagaaatcaggttataaaagttggacaccacaaataggatattcagctacatcc
tcttcagtttctgcacatgccccatcagttattgtagctgtggtagaagggagaggactt
gccagaggtgaaataggaatggcaagcgttgatttaaaaagccctcaaattatattatcc
cagtttgcagacaatacaacatatgccaaggtgatcactaagctcaaaattttatcacct
ttggaaataataatgtcaaatactgcttgtgttgtggggaattcaacaaagttgttcact
ctgatcacagaaaatttcaagaacgttaatttcagtactatccaaaggaaatacttcaat
gaaaccaaaggattagaatacatcgaacaattatgtattactgaattcagcactgtccta
ctggaggttcaatccaagtattactgccttgcagctgttgcagctttactaaaatatgtt
gagtttattcaaaattcagtttatgcaccaaaatcgctgaagatttgttttcagggtagt
gaacagacagccatgatagattcatcctcagcccaaaaccttgaattgttaattaataac
caagactgtaggaataatcatactctttttggtgttttaaattatactaagactcctgga
gggagtagaagacttcgttctaatatattagaacctctagttgatattgaaaccattaac
atgagattagattgtgttcaagaactacttcaagatgaggaactcttttttggacttcaa
tcagttatatcaagattccttgatacggagcagcttctttctgttttagtccaaattcca
aaacaagacacggttaatgcagctgaatcaaaaataacaaatttaatatatctaaagcat
accttggaacttgtggaccctttaaagattactctgaagaactgtaacacacctttatta
agagcttactgtggttccttggaagacaagaggtttgaaatcatacttgaaaagattaaa
acagtaattaatgatgatgcaagatacatgaaaggatgcttgaatatgaggactcagaag
tgctatgcagtgaggtctcacataaatgaattccttgacatagccagaagaacatataca
gagatagtagatgacatagcaggaatggtaacgcagcttgcagaaaaatatagtctgcct
ttaaggacaagttttagctctgctcgaggatttttcattcagatgactacagattgtaca
gtgctacccactgatcaacttccttcagaatttattaagatttctaaagtgaaaaattct
tacagttttacatcagcagatttaattaaaatgaatgaaagatgccaagagtctttgcga
gaaatctatcacatgacttacatgatagtgtgcaaactgcttagtgagatttatgaacat
attcattgcttatataaactttctgacactgtgtcaatgctggatatgctactctctttt
gctcatgcctgcactctttctgactatgtacgtccagagttcactgacactttagcaatc
aaacagggatggcatccgattcttgagaaaatatctgtggagaaacctgttgccaacaat
acttatataacagaagggagtaattttttaatcataactggaccaaatatgagtgggaaa
tccacatatttaaaacagattgctctttgtcagattatggcccagattggatcttatgtt
ccagcagaatattcttcctttagaattgctgaacagatttttacaaggatcagtactgat
gatgatattgaaacaaattcatcaacatttatgaaggaaatgaaagagatagcatatatt
ctacataatgctaatgacaaatcactcataataattgatgaacttggcagaggtactaat
acagaagaaggtattggtatttgttatgctgtttgtgaatatctgctgagcttaaaggca
tttacactgtttgctacacatttcctggaactatgccatatagatgttttgtatcctaat
gtagaaaacatgcattttgaagttcagcatgtaaagaatgcctcaagaaataaagaagca
attttgtatacatacaaactttctaaaggactcacagaagaaaaaaattatggtttaaaa
gcagcagaggtatcatcacttccacaatcaattgtcatggatgccaaagaaatcacaact
caaattgcaagacaaattttgcagcaccaaaggagtaccccggagatggaaagacagaga
gctgtgtatcatctagccacaagacttgttcaaacggctcgaaattctcaattggatcca
gacagtttgcggatgtatttaaataatctcaagaagaaatatgaagaagatttatgcaag
gctgagcaagttccaggaaaaactgaagaataa
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