Marmota marmota marmota (Alpine marmot): 107146499
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Entry
107146499 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107146499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107146499
Transporters [BR:
mmma02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107146499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_22
nSTAND3
AAA_13
SRP54
Motif
Other DBs
NCBI-GeneID:
107146499
NCBI-ProteinID:
XP_048646016
Ensembl:
ENSMMMG00000009203
LinkDB
All DBs
Position
Unknown
AA seq
1747 aa
AA seq
DB search
MGSPRAGGGVGPRSRGASDPEGGRRLRGANSRGQRVPKCHQPHPARRQRAEPSPSARKMA
VFKKLKLLLWKNFILKKRRILMTVLEILMPLLFSAVVLYLRFNSVPRKRAATNYSAIDVS
SLPDFFHQFPVKNKFQLVYIPSKSETLKALTEMVEDTFDVEFEVLGFSSMSVFESYKIND
PKAFYILVGIVFDHNFNDSREPLPLGVKYNLRFSYIRRNFASMKHAFLQEDSEGWCTSFL
YPPNLSYEPREFAFTDGGIPGYYKEGFLGIQHAVDKAIMHHHARNASADMFERLNMLLQR
FPHGPHIQDGFFLVLQNEFPLFLMLSFICIELIIINTVLLEKERKLKEYMYMMGLNSWLH
WVAWFITFFISVFIAVSIMTILFCTEVENMAVFKNSDPSLIFVFLMCFAVATIFFAFMIS
TFFQRAHVGTASGGIIFFFTYLPYLYLTFSYHQRSYFEKITFCLFSNVAMAMGVHFISMF
EAKSTGIQWKNMGSIRGEFSFIQVMLMLLLDSLLYCIITWYVESIFPGKFGIPKPWYFFA
MPSYWHGKPIPVTHALLDMGDPNEAPKKEFIQXTDLIRGIEIQHLYKVFYRRGNAHIAVK
DLRMNLYRGQITVLLGHNGAGKTTTCSMLTGLISPSSGQAYINGYEISKDMVQIRKSIGW
CPQHNILFDNFIVAEHLFFIGRLKGLSQQKCPEEVKQMLHILNLEDKRNSRSKFLSGGMK
CKLSIGIALIVGSKVLMLDEPTSGMDAISRRAIWDLLQKQKSDRTILLTTHFMDEADLLG
DRIAIMAKGELQCCGSSLFLKQKYGAGYYMTLLRNPYCDTEKISHLIYHHIPNAVMESSV
GEELIFIFPKEHSQPTLHRFESLFTDLEMKQTELGITSFGASVTTMEEVFVRVCMLADYS
TDISAKKQPSIHPHSLISRVPVERIKYLHSRIFSLQTGLPITLNTGFSLLCQQFYAMFLK
RVIYSRRNWMVMLPVQILVPLVIIILSLTFFNFKMRSMGSVPLQLALNTYGQTIVPFFVS
QNFKLDPQLSDHFANMLVAQGQIPLEVPGPVEEFLLKKAEAEPEDFNRLYVVAVSFEDVD
NHTIVRGLFNNQAYHSPALALTLVDNYLFKLLSGARASITVSNPPQPQTAMEFSENVLYQ
GPKGHYLIINLLFGMAFLSSSFSMLTVRERRIKAKHIQFISGVYMAAFWFSAMLWDLLSF
LVCTLLLIDGVILFTELGYTEISESSDHTFLILPGHCLGMAFSNLYYNFELQKFCNSKNL
SQIECKEVSEGHVIQKNIYAWESLGIGKYLAALAISGPLYIILLFLVETKVFRRLKARIS
NFFPLSWELXARLLAAASVPEDQDVEEEAKTVRTYLETLQKTHPLIVKEVSKVYIKKVPL
LAVNKVSFTAQAKECFGLLGINGAGKTSIFKMLTGQKPITCEDAFIRGLSISSDLGKVRQ
WIGYCPQFDALLSFMTGRETLVMYARIRGIPEHHISSCVDQILEDLVMFVYADKLVKTYS
GGNKRKLSTAIALIGDPAVIFLDEPSTGMDPMARRLLWGTVGKARESGKAIVITSHSMEE
CEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLWAKVRREGQQEALEEFKAFVDLTFS
GSVLEEEHQGMVHYHLPGNDLSWGKVFGILEQAKKKYLLEDYLVNQISLEDIFLNFASPV
PPTQGTIQQEQAEPDRSSSPSLPCPQPCSPPSQPLLPSSSPPSQPPLQSPSSLSQSPSLP
SSEPVLW
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggggtctcctcgagcgggagggggcgtgggtcccaggtcgcggggggcgtcagatccc
gagggtggacggcggctgcgcggggccaacagtcgaggccagcgggtccctaagtgccac
cagccacacccggcgcgacgtcagcgtgctgagccttccccttcagctagaaaaatggca
gtgttcaagaagttaaaacttcttctctggaagaatttcatcttaaagaagcggaggatt
ctgatgacagtgcttgaaatcttgatgccattactattttctgcagttgtattgtatctt
cgttttaatagtgtcccaagaaaaagagctgctactaattacagtgcaattgatgtcagt
tcgctgccagacttcttccatcagtttcctgtgaaaaataaatttcaactagtttatatc
ccttccaagagtgagactttgaaggctctcactgaaatggtggaagatactttcgatgtt
gagtttgaagttctaggcttttcttccatgtctgtgtttgaaagttacaaaattaatgat
cccaaagctttctacatattggtaggaattgtttttgaccataacttcaatgacagcagg
gaacctttgccacttggggtgaagtataacttgcgcttcagttatattcggaggaacttt
gcatcaatgaagcatgcgtttcttcaagaggactccgaaggctggtgcacatcctttctt
tatcctcctaacctaagctatgaacccagggaatttgcatttactgatggcggaatccct
ggatactacaaagaaggcttcctgggcatacagcatgctgtggacaaagccattatgcat
caccatgctcgcaatgcatcagctgacatgtttgagagactcaatatgctcttgcagagg
ttcccacatgggccccatattcaggacgggttcttcctggtccttcagaacgagtttcca
ctattcctcatgctcagctttatatgcattgagctcatcatcatcaatactgtcctactg
gagaaagagagaaaactgaaggaatatatgtatatgatgggattgaacagctggctgcac
tgggttgcttggttcatcacattcttcatttctgtcttcattgctgtttctatcatgacc
attctcttctgcacagaggtggaaaacatggctgtgttcaagaatagtgatcctagtctg
atttttgtttttctaatgtgttttgctgttgctacaattttctttgcattcatgatcagc
acattcttccaaagagcacatgttggaactgcctcaggaggcatcatcttcttcttcacc
tacctcccctacctgtacctcacattcagctaccaccagaggagctactttgaaaagata
accttttgtctcttctcaaatgttgccatggcaatgggagtccacttcatctccatgttt
gaggcaaaaagcacaggcatccaatggaagaacatgggcagtatccgtggagagtttagc
ttcattcaggtgatgctgatgctcctgctggattcattattgtactgtataataacctgg
tatgtggaatccatcttcccagggaagtttgggatacccaagccttggtacttctttgcc
atgccctcctactggcatgggaagcctattccagttacacatgcactactggacatgggt
gatcctaatgaagctccaaaaaaggagttcatacagngaactgatctgataagaggaatt
gaaatccagcatctatacaaggtattttacaggagagggaatgcacacatagcagtcaaa
gatctgcgcatgaatctgtacagaggtcagatcactgttcttctgggacacaacggagca
ggaaaaaccaccacctgctccatgctcacaggtcttatttccccttcaagtggacaggca
tatatcaatggatatgagatttcaaaagacatggttcaaatcaggaagagcataggctgg
tgcccacaacacaatatcttatttgataacttcatagtagcagaacatcttttttttatt
gggagattgaaaggcctgtctcagcagaagtgccctgaagaagtcaagcagatgctgcac
atcctcaatctggaggacaagcgcaactcacggtccaagttcctgagtgggggcatgaaa
tgcaagctgtccatcggcatcgccctcatagtaggctccaaggtgctgatgctggacgaa
cccacctcaggcatggacgccatctccaggagggccatctgggaccttcttcagaagcag
aagagtgaccgcaccatcctcctgaccacccacttcatggacgaggctgacctactgggg
gaccgcattgccatcatggccaagggggagctgcagtgctgtgggtcatcactgttcctc
aagcagaaatatggtgcaggatactatatgactttactgagaaatccttactgtgacaca
gagaagatttctcatcttatttatcatcacataccaaatgcagttatggagtccagcgtt
ggagaagaattaatatttatatttcctaaagagcattcacagccaaccctccatagattt
gaatctctatttactgacctggaaatgaagcagacagagctgggaatcaccagctttggg
gcttctgtcactaccatggaggaagtgttcgttagggtttgtatgttggcagactacagt
acagatatttcagccaagaagcaaccctctattcatccccattccctgattagcagagtt
cctgttgaaagaattaaatatcttcattcaaggatcttctcattacagactggtctacca
atcacactaaacactggattcagtcttctctgccaacaattctacgccatgttcctgaaa
agggtcatatattctcggcgcaactggatggtgatgttacctgtacagatcttggtgcct
ctggtgatcattatattaagcctcacattcttcaactttaaaatgaggagcatgggaagt
gttcccttacagttggctctaaatacatatggtcagactattgttccattctttgtttct
cagaatttcaaactggatcctcaactttcagatcattttgcaaatatgcttgtggctcag
ggacagattcctctggaagtcccgggtcctgtagaggagtttctattgaaaaaggcagaa
gcggaacccgaggactttaataggctatatgtggtagcagtttcctttgaagatgtagat
aaccacaccatagtgagagggctgttcaacaaccaggcgtaccattcccctgccttggct
ctgactctggtggacaattatctcttcaagttgctttctggtgccagggcttccattacc
gtttccaacccccctcaacctcagacagccatggagttctcagagaatgtcttataccag
ggccctaaaggacattatcttattatcaacttgctttttggaatggcttttttatctagc
tctttttccatgttgacggtcagagagagacgcattaaggccaagcacatccagttcata
agtggagtttacatggctgctttctggttctccgctatgctgtgggatctcctgtccttc
cttgtctgcactctgctcctgatagatggagtcattctctttacagagttgggctacaca
gaaatctcagagtcctcggatcatacttttctaatacttccaggacactgtctggggatg
gctttttccaacttgtattacaactttgaactacaaaagttttgcaattccaagaatctg
agccagattgagtgcaaagaagtttcagaaggacatgtgattcaaaagaacatctatgcc
tgggaatcccttgggatagggaaatatctggcagccttggctatctcaggacctttgtac
atcatcctgctttttcttgttgaaaccaaagtgttcaggagactgaaagctaggatttct
aacttcttccccttgtcttgggaactataggcaagattgctcgcagcagcatcagtgcct
gaagaccaagatgtagaagaggaggcaaaaactgtcaggacttatttggaaacgttgcaa
aagacacatccactaattgttaaagaagtgtcgaaggtctatatcaagaaggtacccctg
ctggctgtgaacaaagtatccttcactgctcaagctaaagaatgctttggtcttcttgga
attaatggagctggaaagacttccattttcaaaatgctgacaggacagaagcccatcacc
tgtgaggatgcatttattaggggtcttagcatcagctctgacctagggaaagtccggcag
tggattggttactgtcctcaatttgatgccttgctgagcttcatgacaggccgagagaca
ctggtcatgtatgcccggatccggggcatcccggagcaccacatcagttcctgtgtggac
cagattcttgaggacttagtcatgttcgtgtatgcagacaagctggtaaagacctacagc
ggtggtaacaagcgcaaattgagcacggctattgccctcattggagatcctgccgtcatc
ttcctggatgaaccgtccactggcatggaccctatggcccggcgcctgctctggggcact
gtgggaaaggcccgcgagtctggcaaggccattgtcatcacctcccacagcatggaggag
tgtgaggctttgtgcacccggctggccatcatggtgcagggtcagttcaagtgcctggga
agcccacagcacctcaagagcaagtttggcagcggctactccctgtgggccaaagtccga
agggaagggcagcaagaagcactggaggagttcaaggcatttgtagacctgaccttttca
ggcagtgtcctagaagaggagcaccaaggcatggtccactaccacctgcctggcaatgac
ctcagctgggggaaggtgtttggcattctggagcaagccaagaagaagtacctgttggag
gactacttggtcaaccagatctccttggaggacatcttcctgaacttcgccagtcctgtg
ccccctactcaaggaacaatccaacaagagcaagcagagccagacaggtcttcatcaccc
tcactgccttgccctcagccttgctcacctccctctcagcctctcttgccttcttcatca
cctccttctcagcctccccttcaatctccctcatctctttctcagtcgccctcactgcct
tcctcagaaccagtcctatggtaa
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integrated database retrieval system
