KEGG   Marmota marmota marmota (Alpine marmot): 107146509
Entry
107146509         CDS       T09644                                 
Symbol
Cacna1h
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
  KO
K04855  voltage-dependent calcium channel T type alpha-1H
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04010  MAPK signaling pathway
mmma04020  Calcium signaling pathway
mmma04713  Circadian entrainment
mmma04925  Aldosterone synthesis and secretion
mmma04927  Cortisol synthesis and secretion
mmma04929  GnRH secretion
mmma04934  Cushing syndrome
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107146509 (Cacna1h)
   04020 Calcium signaling pathway
    107146509 (Cacna1h)
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    107146509 (Cacna1h)
   04925 Aldosterone synthesis and secretion
    107146509 (Cacna1h)
   04927 Cortisol synthesis and secretion
    107146509 (Cacna1h)
  09159 Environmental adaptation
   04713 Circadian entrainment
    107146509 (Cacna1h)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    107146509 (Cacna1h)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmma04040]
    107146509 (Cacna1h)
Ion channels [BR:mmma04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   107146509 (Cacna1h)
SSDB
Motif
Pfam: Ion_trans PKD_channel
Other DBs
NCBI-GeneID: 107146509
NCBI-ProteinID: XP_048645374
LinkDB
Position
Unknown
AA seq 2343 aa
MTEGALAADEVRVPLGAPPPSPAAAVGTSPGESWGAXGREAERGSRPVASPPESPAAERG
AELGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGM
FRPCEDLECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIV
MAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGM
QKCSHIPGRRELRMQCTLGWEAYVQSQAAGASHNACINWNQYYNVCRSGDLNPHNGAINF
DNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQ
FSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHVIRKVKRRGLRLYAR
WQSRWRKKVDPSSSLQGQGPGQRQRRAGRCAASVHHLVYHHHHHHHHHYHFSHGSPRRPT
PEPGTRDTRLVPAGAPRSPPCLGHRPPDSESVHSIYHAGCHVEGPQERARVAHTAATTAA
SLKLASGLGTMNYPTILPSGLVGNKGSTSPGPKGQRAVPPRTMGHSPLSLGGPGPYEKMQ
HVVGEHGLGRASSRLSGLSVPCPLPSPQAGTLTCELKNCPYCASALEDPELEFSGSESGD
SDAHGVYEFTQDVQRSDRRDPMQPPPAADTPGQGGVQCRPQRRPASSRPGWPGRLWASFS
GKLRRIVESKYFNRGIMVAILVNTLSMGVEYHEQPEELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIIVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDSDEDKTSTHFEEDLDKFRVLPASEMKMSSLVVTPNGHLEGRGSLPPPLIMHTAAT
PIPTPKSSPHLDVVHGLLDSRRGSSSSVDPQQGDQKSLASLRSSPCAHWGPSSAWSSRRS
SXXXXXXXXXSSVLWWSSPGPQASPLRRAESLDHHSTLDLQSPRPAALLPAKFHDCNGQT
VALPSEFFLRIDSHKEDTVELDDDVEDSCCFRLHKVLEPYTPQWCRSRESWALYLFSPQN
RLRACCQKVIAHRMFDHVVLVFIFLNCITIALERPDIDPGSTERAFLSVSNYIFTAIFVV
EMMVKVVALGLLWGERAYLQSSWNVLDGLLVLVSLVDIVVAMASAGGAKILGILRVLRLL
RTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEG
ADTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQ
QPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEEEEARRREEKRLRXP
DISPTPSRPLAGTFPSPEAQRRPYYADYSQARRSIHSLCTSHYLDLFITFVIGLNVITMS
MEHYDQPKSLDEALKYCNYVFTIVFVIEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMG
IALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLL
FMLLFFIYAALGVELFGRLECTEDNPCEGLSRHATFANFGMAFLTLFRVSTGDNWNGIMK
DTLRECAREDKHCLGYLPALSPLYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAE
MDAELELEMSQGPPARPSPPESPDTGPDGPTLLAVRKVSVSRTLSLPNDSCMFRPVAPAT
APQPHPLQEARMETYAGSTPSGLVTSAHSPPLEPSASLQVPSATSPPARGSDPQCTLSPR
GAPHSPSLSRLLCRQEAMRRESLEEQADGRGDSAPGSTESFEKSPARQDSLGGPPRSPPC
SPRPASIRTRKHMFGQRCISSRLPAPSGDEAEASDPADEEVSHITSSAQPWPLASTHSLA
ASPVTSPVARGVAGSAQDLRRFCSVDAQGFLDKPGRVDMQRWPSMELGSGDSHLDPREVK
AWVPELEPALGARRKKKMSPPCISVDPPMEDESSTRPPAAEGGSSTLRRRTPSCEAALHR
DCLEPTEGPGAGGDPAAKAERWGQACRSEHLTVPSFAFEPLNVGGPSGDPLLDSDHSGTP
EPTASFSGATASLEPHETEPPLPSGDAPQKDQELYLTVPQTPLKKAGLLPATPALGDSAD
GSV
NT seq 7032 nt   +upstreamnt  +downstreamnt
atgaccgagggcgcgctggccgcggacgaggtccgggtacccctgggcgcgccgcccccg
agccctgcagcggcggtagggacgtcccccggagagtcctggggcgccnggggacgcgag
gcggagcgggggtccaggccggtcgcttcgccccccgaaagcccggcagccgagcgcggc
gcagagctgggcgccgacgaagagcagcctgtcccgtacccggcgctggcggcgaccgtc
ttcttctgcctcgggcagaccacgcggccgcgcagctggtgcctccgactggtctgtaac
ccatggttcgagcacgtcagcatgctggtcatcatgctcaactgtgtgaccctgggcatg
ttccggccctgcgaggacctggagtgccgctcggagcgctgcagcatcctggaggccttc
gatgacttcatcttcgccttcttcgctgtggagatggtgatcaagatggtggccctgggg
ctgtttgggcagaagtgctacctgggcgacacgtggaacaggctggacttcttcatcgtc
atggcaggtatgatggagtactccctggacggacacaacgtgagcctctctgccatccgc
accgtgcgcgtgctgcggcccctccgcgccatcaaccgcgtgcccagcatgaggatcctg
gtcaccctgctgctggacacgctgcccatgctcgggaatgtcctcctgctctgcttcttc
gtcttcttcatctttggcattgttggtgtccagctctgggccggcctgctgcggaaccgc
tgcttcctggacagcacgtttgtcaggaacaacaacctgaccttcctacggccgtactac
cagacggaggagggtgaggagaacccctttatctgctcctcacgccgtgacaacggcatg
cagaagtgctcccacatccccggccgccgggaactgcgcatgcagtgcacattgggctgg
gaggcttacgtgcagtcccaggctgcgggcgccagccataacgcctgcatcaactggaac
cagtactacaacgtgtgccgctcaggggacctcaacccccacaacggtgccatcaacttc
gacaacatcggctacgcttggatagccattttccaggtgatcacgctggagggctgggtg
gacatcatgtactacgtcatggacgcccactccttctacaacttcatctacttcatcctg
ctcatcatcgtgggctccttcttcatgatcaacctgtgcctggtggtgatcgccacgcag
ttctcggagaccaagcagcgggagaaccagctgatgcgtgagcagcgtgcccgctacctg
tccaacgacagcacactagccagcttctcagagccaggcagctgctacgaggagctgctc
aagtacgtgggccacgtcatccgcaaggtcaagcgccgcggcttgcgcctctatgcacgc
tggcagagccgttggcgcaagaaggtggaccccagcagcagcctgcagggccagggcccc
gggcagcggcagcgccgggcaggcaggtgcgcagcctccgtgcaccacctggtataccac
caccaccaccaccaccaccaccactaccacttcagccatggcagcccgcgcaggcccact
cctgaaccaggcacccgcgacactaggctggtgcctgccggcgcgccacgatcgccgccc
tgcctgggccataggccgcctgactccgagtctgtgcacagcatctaccacgccggctgc
cacgtggaggggccgcaggagagggcccgggtcgcacacactgcagctaccactgctgcc
agcctcaagctggcctcggggctgggcaccatgaactaccctactatcctgccctcaggc
ctggttggcaacaaaggcagcaccagccccgggcccaagggccagcgggccgtgcccccg
aggaccatggggcatagccccctgagcctgggtggccctggcccctacgagaagatgcag
cacgtggttggggaacatggactgggccgggcttccagccgtctctcaggcctgagtgtg
ccctgccctctgcccagcccccaggcgggcacactcacctgtgaactcaagaactgccca
tactgtgccagcgctctggaggaccctgagcttgagttcagtggctccgagagcggggac
tcagatgcccatggggtctacgagttcacacaggatgtgcaacgcagcgaccgccgcgat
cccatgcagccacccccagcagcagatacaccaggccagggtggtgtgcaatgccggcca
cagcggcgaccagcctccagcaggccaggctggccaggccgtctctgggcctccttcagt
ggcaagctgcgccgcatcgtagagagcaagtacttcaaccgtggcatcatggtggccatc
ctggtcaacacactgagcatgggcgtcgagtaccatgagcagccagaggagctgaccaat
gctctggagatcagcaacattgtgttcaccagcatgtttgccttggagatgctgctgaag
ctgctggcctgtggcccgctgggctacatccggaacccctacaacatctttgatggcatc
atcgtggtcatcagcgtctgggagatcgtggggcaggcggatggaggcctgtccgtgctg
cgcaccttccggcttctgcgggtactgaagctggtacgcttcctgccggcactgcggcgg
cagctcgtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatg
ctcttcatcttcatcttcagcatcctgggcatgcacctgtttggctgcaagttcagcctg
aagacagacacaggagacactgtccctgacagaaagaactttgactccctgctttgggcc
atcgtcactgtgttccagatcctgacacaggaggactggaatgtggtgctgtacaatggc
atggcctccacttcctcgtgggccgccctctacttcgtggccctgatgaccttcggcaac
tacgtactcttcaacctgctggtggccatcctggtggagggcttccaggcagagggtgat
gccaccagatccgactctgatgaggacaagacatccacccactttgaggaggatctcgac
aagtttagggtcctgccagcctcagagatgaagatgtcatcgctggtggtgacccccaac
gggcacctggagggccgggggagcctgccccctcccctcatcatgcatacggcagccacg
cctattcccactcccaagagctctccacacctggacgtggtccatggcctcctggactca
cgccgtgggagcagcagctctgtggacccccagcagggggaccagaagtctctggccagc
cttcgcagctcaccctgtgcccactggggccccagcagcgcctggagcagccggcgctca
agctgnnnnnnnnnnnnnnnnnnnnnnnnntccagtgtgctgtggtggtcctcgcccggg
ccccaagccagcccactgcggcgcgccgaatccctggaccaccacagcacactggacctg
cagtccccgcggcctgccgccctcctgccagccaagttccacgactgtaatgggcagaca
gtggccctgcccagtgaattcttcctgcgcattgacagtcacaaggaggacacagttgag
ctggatgacgatgtggaagacagctgctgcttccgcctacacaaggtgctggagccctac
acgccccagtggtgccgcagccgcgagtcctgggccctctacctcttctccccgcagaac
aggctgcgtgcctgctgccagaaggtcatcgcgcaccggatgtttgaccacgtggtcctc
gtcttcatcttcctcaactgcatcaccatcgccctggagaggccagacattgaccccggg
agcaccgaacgggccttcctcagcgtctccaactacatcttcacagccatcttcgtggtg
gaaatgatggtgaaggtggtagccctgggtctgctgtggggcgagcgtgcctacctgcag
agcagttggaacgtgctggacgggttgctggtcctggtgtccctggtggacatcgttgtg
gccatggcctccgctggtggtgccaagatcctgggcattctgcgcgtgctgcgcctgttg
cggaccctgcgacctctgagggtcatcagccgggctccaggcctcaagctggtggtggag
acgctgatctcatcgctcaggcccatcgggaacatcgtactcatctgctgcgccttcttc
atcatcttcggcatcctgggggtgcagctcttcaaggggaagttctactactgcgagggt
gccgacaccaggaacatctccaccaaggctgagtgccgggctgcccactaccgctgggtg
cggcgcaagtacaacttcgacaacttaggccaggcgctgatgtcactgttcgtgctatcg
tccaaggacggctgggtgaacatcatgtatgacggactagacgccgtgggcattgaccag
cagcccgtgcagaaccacaacccctggatgctgctgtacttcatctccttcctgctcatc
gtcagcttctttgtgctcaacatgttcgtgggcgtggtggtggagaacttccacaagtgt
cggcagcaccaggaggaggaggaggcgcggcggcgggaggagaagcgtcttagganccct
gacatttcccccacccccagcaggcccctggcaggcactttccccagcccagaggcccag
cgccggccctactacgctgactactcccaggcacgccgctccatccactctctgtgcacc
agccactacctagacctcttcatcacctttgtcattggcctcaacgtcatcactatgtcc
atggagcactatgaccagcccaagtcgctggacgaggccctcaagtattgcaactacgtg
ttcaccatcgtctttgtcattgaggctgtgctgaagctggtggcctttgggttccggcgg
ttcttcaaggacaggtggaaccagctggacctggccatcgtcctgctgtccatcatgggc
attgccctggaggagattgaaatgaatgccgcattacccatcaaccccaccatcatccgc
atcatgcgtgtgctccgtatcgcccgtgtgctgaagctgctgaagatggccacaggcatg
cgggccctgctggacactgtggttcaagccctgccccaggtagggaaccttggccttctt
ttcatgctcctgttttttatctatgctgccctgggagtggagctgtttgggaggctagag
tgcactgaggacaacccctgcgagggcctgagcaggcacgccacctttgccaacttcggc
atggccttcctcacgctgttccgcgtgtccaccggggacaactggaatgggatcatgaag
gacacactgcgggagtgtgcgcgtgaggacaagcactgcctaggctacctgccggcactg
tcgcccctgtacttcgtcaccttcgtgctggtggcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaggacgccgag
atggatgccgagctcgagctggagatgtcgcaggggccccccgcccgcccctcaccccca
gaaagcccagacacaggcccagatggccccaccctcttggccgtgcgcaaggtgtctgtg
tccaggacactctcactgcccaacgacagctgcatgttccggcccgtggcacccgccacg
gccccccaaccccaccccctgcaggaggccaggatggagacctacgcgggcagcaccccc
tcaggcttggtcacctccgctcactcgccgcccctggagccttctgcctccctgcaggtc
ccatcagccacatccccacctgccaggggcagcgaccctcagtgtaccctgtccccccgt
ggcgcaccccactcccccagcctcagtcggctgctctgcagacaggaagccatgcgcaga
gaatcgctggaagagcaggctgatggtcgtggggacagtgccccgggatccacagagtct
tttgagaagagcccagccaggcaggactccctggggggccccccacggtccccgccctgc
tccccacggcctgccagcattcgcacccgcaagcacatgttcggacaacgctgcatctcc
agccggctgccggcccctagtggagatgaggctgaagcctcagacccagctgacgaggag
gtcagccacatcaccagctctgcccagccctggcccttggcctcaactcatagccttgca
gcctccccggtgacctcccctgtggcccgaggggtggcaggcagcgcgcaagacctacgc
aggttctgcagtgtggacgcccagggtttcctagacaaaccaggccgggtggacatgcag
aggtggccctccatggagctgggtagcggggacagccacctggatcccagggaggtcaag
gcctgggtccctgagctcgagccagccctgggggcacgcaggaagaagaagatgagcccc
ccctgcatttctgtggatcccccaatggaggatgagagctctacccggccccctgcagca
gaaggtggcagcagcaccctgcggcgcaggaccccatcctgcgaggctgccctgcacagg
gactgcctggagcccaccgagggcccaggtgcaggaggggaccctgcagccaaggcggag
cgttggggccaggcctgccgatcagagcatctaactgtgcccagctttgcctttgagcca
ctgaatgtggggggccccagtggagaccctttgctggacagtgaccacagtgggacccca
gaacccacagcttccttctcaggggccacagcatctctagaaccccatgaaacagagcca
cccttgccctctggagatgccccacagaaggaccaggaactatacctcacagttccccaa
accccgctaaagaaagcagggttgctcccagccacccctgccctgggtgacagtgcagat
ggatctgtgtag

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