Marmota marmota marmota (Alpine marmot): 107146837
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Entry
107146837 CDS
T09644
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107146837 (Tmc5)
03037 Cilium and associated proteins [BR:
mmma03037
]
107146837 (Tmc5)
Transporters [BR:
mmma02000
]
Other transporters
Pores ion channels [TC:
1
]
107146837 (Tmc5)
Cilium and associated proteins [BR:
mmma03037
]
Other cilia and associated proteins
Stereociliary proteins
107146837 (Tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
107146837
NCBI-ProteinID:
XP_015346601
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MSAYYRNNSLNGNTEHPDYSRSQGCTRGHLKTHDYPDFSGPQDNPGYPSTRNNPFSAGSR
TNPDYPVSLTEPDYPGSPNKPDYPGARNNPYSEDSRTSPDYHRSLPEPDYIESQSQPYHP
GSSREPDYPGSQRNAEFASSRSSGNYPGSRINPGYLGSLANPDYPGAQDNSSHSGPRANS
NHPGSRRNQEPAGSRINSYIDDPGEPDYPGAENQTNFPHIWGEPDYPSAEDYRNSPNIFG
EPDYPGAESIHGYGPSETREMTRRSNASLGVLRRESEDYPGSFEMTSMEMADPRDPSLPG
APGKGYVNPAYVGEGGPVCAYGNPPLSAGDWHKSPEGQKLIASLIPMTSRDRIKAIRNQP
RTMEEKRKLRKVVDKEKSKQGPRALEVACCTRCLHTFSLVYRRSKNSISELLNTTSLWQK
TLKVIGGKFGTSVLSYFSFLRWLLKFNIFSFIVNFSFLVIPQLTVAQKNTLQFTGLEFFT
GAGYFRDTVMYYGFYTNSTIRHGSSRLAYNMQLAYLFTIGACLVTCFFSLLFSMAKYFRN
NFINPHIYSRGIAKLIFCWDYTVTHEKAVKLKQKSLSTEIRENLSEIRLENTKLTFHQQL
TRLSAHVAAWLVSTGMAIACCVAVYYLAEYNSEFLKTHQNPGAVLLLPFLVSCINLAVPR
LYSMLRLVERYELPRHEVYILLIRNIFLKISIIGILCYYWLNIVALSGEECWETLIGQEI
YRLLLMDFVFSLADSFLGEFLRRIIGKRFITSLGLQEFDIARNVLELIYAQTLVWIGMFF
CPLLPFIQMITLFTMFYVKNISLIVNFQPPSKAWRASQMITVFIFLLFFPSFTGVLCTLA
ITIWRLKPSADCGPFRGLPSFIYSVYRWIDTLSGRPGYQWVVWIYHNLIGSVHFFFILTL
IVLIITYLYWQITEGRKIMIRLLHEQIINEGKDKMFLIEKLIKLQDMEKRANPSALILER
REVEQQVPLHWGEQAAAAPDLRFRRSFQEDNRKV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctactacaggaataacagcctcaacggcaacacagagcaccctgactattca
aggtctcaaggctgtactcgagggcatttaaaaactcacgattatccagacttctcaggt
cctcaggacaatccaggctatcccagcaccaggaacaatccattctctgcaggctccaga
acaaatccagactatcctgtgtctctcacagaaccagattatcctggatctccaaataaa
ccagattatcctggtgccaggaacaatccctattctgaagattccagaacaagtccagac
tatcacagatctctgccagagccagattatattgaatctcagagccagccataccatcca
ggctcatccagagaaccagattaccctggatctcaacgaaatgctgaatttgcaagttcc
agaagtagtggaaactacccaggttccaggataaacccaggttatttgggatccctggca
aatcctgactaccccggagcacaggacaactctagccattctggccccagagccaattcc
aaccatccaggctcaagaaggaatcaagaacctgctggttccagaatcaattcatatata
gacgacccgggagagcctgattatccaggtgctgagaatcaaactaactttccacacatt
tggggggaaccagactatcccagtgctgaggattatcggaattctccaaacatttttggg
gaacctgattacccaggagccgagagtattcatggttatggcccttctgagacccgggaa
atgaccaggaggagtaatgcctccttgggcgtccttaggagagagagtgaagattaccct
ggaagttttgaaatgacgtccatggagatggcagatccacgcgacccatctctgccaggt
gctcctggaaagggctatgtgaaccctgcgtatgtgggcgaaggtggccctgtctgtgcc
tatggaaacccaccgctgtctgcaggtgattggcacaagtcacctgaaggacaaaagtta
atagcatccctgatccccatgacatccagggacagaatcaaggccatcaggaaccagccc
aggaccatggaagagaagagaaagctgaggaaagtggttgacaaagagaagagcaaacag
ggtccccgtgccctggaggtggcctgctgcacccggtgtctgcacaccttctctctggtc
taccggagatccaagaacagcatctctgagctcctcaacaccaccagcctgtggcagaag
acgctcaaggtcatcggaggcaagtttggaaccagtgtcctctcctatttcagctttctg
aggtggcttttgaagttcaacattttctccttcatcgtgaacttcagcttcttggttatt
ccccagctgacagtggcccagaagaacacactccagttcacggggctggagttttttacg
ggggcgggttacttcagggacacggtgatgtactacggcttctacaccaattccaccatc
cggcacgggagcagcaggctggcctacaacatgcagctggcgtacctcttcaccatcggg
gcctgcttggtcacctgcttcttcagcttgctcttcagcatggccaagtatttccggaac
aacttcatcaacccccacatttactccagagggatcgccaaacttatcttctgctgggac
tatactgtcacgcacgaaaaagccgtgaagctgaaacagaagagtctgagcacggagata
agggagaacctgtcagagatccgactggagaacaccaagctcaccttccaccagcagctc
acgcgcctgtctgcccacgtggcggcctggctggtgtccactggcatggccatcgcctgc
tgtgtcgccgtctattacctggccgagtacaactccgagttcctgaagacgcaccagaac
cccggagccgtgctgttactacccttccttgtgtcctgcatcaacctagctgtgcctcgc
ttatactccatgctcaggcttgtggagaggtacgagctgccccggcacgaggtctacatc
ctcctgatccgaaacatctttctaaaaatatccatcattggaattctttgttactactgg
ctcaacatcgtggccctgtccggtgaagagtgttgggagaccctgattggccaggaaatc
taccggctcctcctgatggacttcgtgttctctttagcggattccttcctgggggagttt
ctgaggaggatcattgggaagcggttcatcacaagccttggcttacaggaatttgacatt
gccaggaatgttctagagctgatctatgcacaaactctggtgtggattggaatgttcttc
tgtcctctgctccccttcatccagatgatcaccctcttcaccatgttttatgtcaaaaac
atcagcctgatagtgaacttccagcccccgagcaaagcctggagggcctcccagatgata
accgtcttcatcttcctgctcttcttcccgtccttcactggggtgctgtgcacgctggcc
atcaccatctggagactgaaaccttcagccgactgcggcccatttcgaggtctgccttcc
ttcatttactctgtctaccgctggatcgacaccctgagcgggcggcctggctaccagtgg
gtggtgtggatctatcacaacctcatcggcagcgtgcacttctttttcatcctcacactc
atcgtgttaatcatcacctatctttactggcagatcacagagggaaggaagattatgatc
aggcttctccatgaacagatcattaatgagggcaaagataagatgttcctgatagagaag
ttgatcaagctacaggatatggagaagagagcgaaccccagcgcactgatcctggaaagg
agggaggtggagcaacaagtgcctttgcattggggggaacaggctgctgctgctcctgac
ctgcgattcaggcgatcatttcaagaagataatcgaaaggtgtga
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integrated database retrieval system
