KEGG   Marmota marmota marmota (Alpine marmot): 107146988
Entry
107146988         CDS       T09644                                 
Symbol
Pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013  Nucleocytoplasmic transport
mmma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107146988 (Pnn)
   03015 mRNA surveillance pathway
    107146988 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107146988 (Pnn)
   03041 Spliceosome [BR:mmma03041]
    107146988 (Pnn)
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107146988 (Pnn)
Spliceosome [BR:mmma03041]
 Complex C
  Other components
   EJC/TREX
    107146988 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107146988
NCBI-ProteinID: XP_015346851
Ensembl: ENSMMMG00000005240
UniProt: A0A8C5YWF4
LinkDB
Position
Unknown
AA seq 743 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENVSALEMEKESEEKEEKDSESQSEPMAQLQTQP
QPQSQPQSQPQPQSQPQPQPQPQPQPQPQPQPQPQSQPVLQPQPLSQPETLPLAVLQPPP
QVIQEQGNLLPERKEFPLETVKLPEVPVEPILTAHSESKTKTKTRSRSRGRARNKTSKSR
SRSSSSSSTSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSR
SRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISES
SRSGKRSSRSERDRKSDRKDKRR
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggagagatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggtggggagcgacggacaagaagagaatcacgccaagaaagt
gacccagaggatgatgatgttaaaaagccagcgctgcagtcttcagttgtagctacctcc
aaagaacgcacacgtcgagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcagaaatttaaacaagagtct
actgttgctactgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaagttgaaaacgagaggagagaactatttgaagagagacga
gctaaacagacagaattgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gagtggaatgaacataatgccaagataattaaatacataagaactaagacaaagccccat
ttattctatattcctggaagaatgtgtccagctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtatagttcatagcgatgcagaaaaagaacaggaggaagaggaacaaaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaagat
agtcagcctgaagaagttatggatgtgctagagatggttgaaaatgtcaaaaatgtaatt
gctgagcaggaagtaatggaaactaatcaagttgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgacgttgagccagataaagaatgtaaa
tctctctctcctggaaaagagaatgttagtgctctagaaatggaaaaggaatctgaggaa
aaagaagaaaaagattctgagtcccagtctgagcctatggctcaacttcaaacccagccc
caacctcaatcccaacctcaatcccaaccccaaccccaatcccaaccccaaccccaaccc
cagccccaaccccagcctcaaccccagccccaaccccaacctcagtcccagccagtactt
caaccccagcctctctctcagcctgagactttgccattagctgttttacagccaccacct
caggttattcaggagcaagggaatttactacctgagcggaaggagtttcctttagagact
gtcaaacttcctgaggtgccagtagagccaatcttgacggcacattcagaaagcaaaacc
aaaaccaaaactagaagcagaagtagaggtcgagctagaaataaaacaagcaagagcaga
agtcgaagcagcagcagtagtagtactagtagcagttcaaccagtagcagcagtggaagc
agttccagcagtggcagtagtagtagtcgaagcagttccagtagtagctccagtacaagt
ggtagcagcagcagagatagtagcagcagcactactagtagtagtgagagtagaagtcgg
agtaggggccgagggcataatagagatagaaagcacagaaggagcgtggatcggaagcga
agggatacttcagggctagagagaagtcacaaatcttcaaaaggtggtagtagtagagat
acaaaaggatcaaaggataagaattcccggtccgacagaaagaggtctatatcagagagt
agtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagac
aaaaggcgttaa

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