Marmota marmota marmota (Alpine marmot): 107146988
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Entry
107146988 CDS
T09644
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107146988 (Pnn)
03015 mRNA surveillance pathway
107146988 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107146988 (Pnn)
03041 Spliceosome [BR:
mmma03041
]
107146988 (Pnn)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107146988 (Pnn)
Spliceosome [BR:
mmma03041
]
Complex C
Other components
EJC/TREX
107146988 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107146988
NCBI-ProteinID:
XP_015346851
Ensembl:
ENSMMMG00000005240
UniProt:
A0A8C5YWF4
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENVSALEMEKESEEKEEKDSESQSEPMAQLQTQP
QPQSQPQSQPQPQSQPQPQPQPQPQPQPQPQPQPQSQPVLQPQPLSQPETLPLAVLQPPP
QVIQEQGNLLPERKEFPLETVKLPEVPVEPILTAHSESKTKTKTRSRSRGRARNKTSKSR
SRSSSSSSTSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSR
SRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISES
SRSGKRSSRSERDRKSDRKDKRR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggagagatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggtggggagcgacggacaagaagagaatcacgccaagaaagt
gacccagaggatgatgatgttaaaaagccagcgctgcagtcttcagttgtagctacctcc
aaagaacgcacacgtcgagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcagaaatttaaacaagagtct
actgttgctactgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaagttgaaaacgagaggagagaactatttgaagagagacga
gctaaacagacagaattgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gagtggaatgaacataatgccaagataattaaatacataagaactaagacaaagccccat
ttattctatattcctggaagaatgtgtccagctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtatagttcatagcgatgcagaaaaagaacaggaggaagaggaacaaaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaagat
agtcagcctgaagaagttatggatgtgctagagatggttgaaaatgtcaaaaatgtaatt
gctgagcaggaagtaatggaaactaatcaagttgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgacgttgagccagataaagaatgtaaa
tctctctctcctggaaaagagaatgttagtgctctagaaatggaaaaggaatctgaggaa
aaagaagaaaaagattctgagtcccagtctgagcctatggctcaacttcaaacccagccc
caacctcaatcccaacctcaatcccaaccccaaccccaatcccaaccccaaccccaaccc
cagccccaaccccagcctcaaccccagccccaaccccaacctcagtcccagccagtactt
caaccccagcctctctctcagcctgagactttgccattagctgttttacagccaccacct
caggttattcaggagcaagggaatttactacctgagcggaaggagtttcctttagagact
gtcaaacttcctgaggtgccagtagagccaatcttgacggcacattcagaaagcaaaacc
aaaaccaaaactagaagcagaagtagaggtcgagctagaaataaaacaagcaagagcaga
agtcgaagcagcagcagtagtagtactagtagcagttcaaccagtagcagcagtggaagc
agttccagcagtggcagtagtagtagtcgaagcagttccagtagtagctccagtacaagt
ggtagcagcagcagagatagtagcagcagcactactagtagtagtgagagtagaagtcgg
agtaggggccgagggcataatagagatagaaagcacagaaggagcgtggatcggaagcga
agggatacttcagggctagagagaagtcacaaatcttcaaaaggtggtagtagtagagat
acaaaaggatcaaaggataagaattcccggtccgacagaaagaggtctatatcagagagt
agtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagac
aaaaggcgttaa
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integrated database retrieval system