Marmota marmota marmota (Alpine marmot): 107147297
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Entry
107147297 CDS
T09644
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
mmma05200
Pathways in cancer
mmma05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107147297 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107147297 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
107147297 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107147297 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107147297 (Tpr)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107147297 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
Motif
Other DBs
NCBI-GeneID:
107147297
NCBI-ProteinID:
XP_015347182
Ensembl:
ENSMMMG00000013565
UniProt:
A0A8C5ZJY7
LinkDB
All DBs
Position
Unknown
AA seq
2363 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEIAQDRNISIQSQFTRTKEEL
EAEKRDLIRTNERLSQELEYLTEDFKRLNEKLKESNTTKGELQLKLDELQASDVSVKYRE
KRLEQEKELLRNQNKWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQM
NGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHRLLKEAGEANKATQDHLLEVEESKDQMEKEMLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRDLGETREREEQETTSSKITELQLKLENSLTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLDDISLMSTPKRSSTSQSVSTPAPVPVI
ESTEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVSEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLSTKELLKNAQKE
ITTLKQHLGNMEVQLASQSSQRTGKGQPGDKEDVDDLLSQLRQAEEQVNDLKERLKTSTS
NVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKAESQLVECKASWEEIERMLKD
EVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLLSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKA
EIARSNASLTNNQNLIQSLKEDLNKIRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQYEELKAQQDKVMETSAQSSGDHQEQHISVQEMQELKDSLNQAETKSKSLENQVENL
QKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAA
KSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREH
QERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSK
VTAAAMPGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPV
FGSTSGSVRSTSPNVQPSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNLVEV
VQSSPVERPSTSTAVFGTVSATPSSSLPKRSREEEEDSTVEASDPVSDDAVEMPLPKKLK
SVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDL
GPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEDDDDENDGEHEDYEEDEEDDDDDEDDTG
MGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGAGESNQRAADSQNSGEG
NTGAAESSFPQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQR
IQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAG
VPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEEPGGRSVPTTPLQVAA
PVTVFTESTTSDASEHASQSVPMVTTSTGTLSTSNETAAGDDGDEVFVEAESEGISSEAG
LEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQ
FNRQRGVSHAMGGRGGINRGNIN
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgttgcagcaagtgctggagcgtaccgagctgaacaagctgcctaagtcc
gtccagaacaaacttgaaaagttccttgctgatcagcagtccgagatcgatgggctgaag
ggacggcacgagaaatttaaggtggagagcgaacaacagtatttcgagatagaaaagagg
ttatcccacagtcaggagagacttgtaaatgaaacacgtgagtgccaaagcttgcggctt
gagctagagaaactcaacagtcaattgaaggcactaactgagaaaaacaaagaacttgaa
attgctcaggatcgaaacatttccattcagagccaatttacaagaacaaaggaagaatta
gaagctgagaaaagagacttaattagaaccaatgagagactatctcaagaacttgagtat
ttaacagaggattttaaacgtttaaatgaaaagctaaaagaaagcaatacgacgaagggt
gaacttcagttaaaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaa
aaacgtttggagcaagaaaaggaattgctacgtaatcaaaataaatggctgaatacagag
ttgaaaaccaaaactgatgaacttctggcccttggaagagaaaaaggaaatgaaattcta
gagcttaagtgtaatcttgaaaacaagaaagaagaggtttctagactggaagaacagatg
aatggtttaaaaacatcaaatgagcatcttcaaaagcatgtagaggatctgttgaccaaa
ttaaaggaggccaaagaacaacaggccagtatggaagagaaattccacaatgaattaaat
gctcacataaagctgtctaatctatacaagagtgctgctgatgactcagaagcaaagagc
aatgaactaactcgggcagtggatgaactacacagacttttgaaagaagctggagaagcc
aacaaagcaacacaagatcatcttctagaagtggaagaatctaaagatcaaatggaaaaa
gaaatgcttgagaaaatagggaaattggagaaggaattagaaaatgcaaatgacttgctt
tctgccactaaacgtaaaggagctatactatctgaagaagagcttgctgctatgtctccc
actgcagcagccgtagctaagatagtgaaacctggcatgaaattaactgagctatataat
gcttatgtggaaactcaggatcagttgcttttggagaaactagagaacaaaagaattaat
aaatacctagatgaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccag
cgtgaggaatatgaacgtgcacagaaagccgtggcaagtttgtctgttaagcttgaacaa
gcgatgaaggaaattcagcgattgcaggaggacactgataaagccaataaacattcatct
gtacttgaaagagacaatcagagaatggaaatacaaataaaagatctttcacaacagatt
agagtgcttttgatggaacttgaagaagcaaggggtaatcatgtaattcgtgatgaggaa
gtaagctctgctgacataagtagttcatctgaagtaatatcacagcatctagtatcttac
agaaatattgaagaacttcaacagcaaaatcagcgtctgctagtggctcttagagatctt
ggggaaaccagagaaagagaagaacaagaaacaacttcctccaaaatcactgaacttcag
ctcaaacttgagaactctctcactgaactggagcaactccgtgaatcacgacaacatcag
atgcagcttgttgattccatagttcgtcagcgtgatatgtatcgtattttattgtcacaa
acaacaggagttgtcattccattacaagcttcaagcttagatgatatttctcttatgtca
actccaaaacgttcaagtacatcacagtctgtttccactcctgctccagtacctgttatt
gaatcaacagaggctatagaagctaaggctgcccttaaacagttgcaggaaatttttgag
aactacaagaaagaaaaagcagataatgaaaaaatgcaaaatgagcaacttgaaaaactt
caggaacaagtcacagatttgcggtctcaaaacaccaaaatttctacccagctagatttt
gcttctaaacgttatgaaatgctgcaagataatgttgaaggatatcgacgagaaataaca
tccttgcatgagagaaatcagaaactcactgcaactactcaaaagcaggaacagatcatc
aacacaatgactcaggacttgagaggagcaaatgaaaagctagcagtttcagaagtaaga
gcagaaaatttgaagaaagaaaaggaaatgcttaaattgtcagaggtccgtctttctcag
caaagagaatctttgttagctgaacaacgagggcaaaacttgctgctgactaatctacaa
acaattcagggaatactggagcgatctgaaacagaaaccaaacaaaggcttagtagccag
atagaaaagctggagcatgagatctctcatctaaagaagaagttggaaaatgaggtggaa
caaaggcacacacttactagaaatctagatgttcaacttttagatacaaagagacagcta
gatacagaaacaaatcttcatcttagcacaaaagaactcttaaagaatgctcaaaaggaa
attactacgttgaaacagcaccttggtaatatggaagttcagcttgcttctcagtcctca
cagagaactggtaaaggtcagcctggtgacaaagaagatgtggatgatcttctgagtcag
ctaaggcaagcagaagaacaggtaaatgacttgaaggagaggctcaaaacaagtactagt
aatgtggagcagtaccgagcaatggtgacatctttagaagaatctctgaacaaggaaaaa
caggtgacagaagaagtacataagaatattgaagttcgtttaaaagaatcagcggaattt
cagacacagttggaaaagaagttgatggaagtagaaaaggaaaaacaagaacttcaagat
gataagagaaaagccatagagagcatggaacaacagttatctgagttgaagaaaacactt
tctagtgtgcagaatgaagtgcaagaagctcttcagagagcaagcacagctttaagtaat
gaacagcaagccagacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaat
aagtatgagagagaattgatgctccatgctgctgatgttgaagctcttcaagctgccaaa
gaacaggtttcaaaaatgacatcaattcgtcagcatttagaagaaacaacccagaaagca
gaatcacagttggtggagtgtaaagcatcttgggaagaaatagagagaatgttaaaggat
gaagtttccaaaagtgtgtctcgctgtgaagatctggagaaacaaaacagactacttcat
gatcagattgaaaaattaagtgacaaggtagttgcctctgtgaaggaaggtgtacaaggt
ccattgaatgtatctctcagtgaagaagggaaatctcaagaacagattttagaaattctc
agatttatacgacgagaaaaagaaattgctgaaactaggtttgaggtggctcaggttgag
agtctgcgttatcgacaaagagttgaacttttagaaagagaacttcaggaactacaggat
agcttaaatgctgaaagggagaaggtccaggtaactgcaaaaacaatggctcagcatgaa
gaactgatgaagaaaactgaaacaatgaatgtagttatggagaccaataagatgctaaga
gaagaaaaggagaggctagaacaggatctccagcagatgcaagcaaaggtgaggaaactg
gagttagatattttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatg
ttgcaggcagagaagaagttgttagaagaggatgtcaaacgttggaaagcacgtaaccag
catttattaagtcagcagaaagatccagacacggaagaatataggaagcttctttctgaa
aaggaagttcacaccaagcgtattcaacagttgactgaagaaattgggagacttaaagcc
gaaattgcaagatcaaatgcatctttgactaacaaccagaacttaatccagagtctgaag
gaagatttaaataaaataagaactgaaaaagaaaccatccaaaaggatttagatgccaaa
ataattgatatccaagaaaaagttaaaactattactcaggtcaagaaaattggacggagg
tacaagactcagtatgaagaacttaaagcacaacaggataaggtcatggaaacttcagct
cagtcttctggggaccatcaggaacagcatatctcagtccaggaaatgcaggagctcaaa
gattcactcaaccaagctgaaaccaagtcaaaatcactggagaatcaagtagagaatctt
cagaagacattatctgaaaaagagacagaagcaagaaatctccaggaacagactgtgcag
cttcagtctgaactttcacgacttcgacaggatcttcaagatagaactactcaggaggag
cagctcagacagcaaataactgaaaaggaggaaaaaactagaaaggctattgtagctgca
aaatcaaaaattgctcatttagccggtgtaaaagatcagctaactaaagaaaatgaggaa
cttaaacaaaggaatggagccttagatcagcagaaagatgaactggatgttcgtatgact
gctctgaagtcccaatatgaaggtcgaattagtcgcttggaaagagaactcagggagcat
caagagagacaccttgagcagagagatgagccccaagaacctaccaataaggtcccagaa
cagcagagacagatcacattgaaaaccactccagcttctggtgaaagaggaattgccagc
acatcagatccaccaacggctaatatcaagccaactcctgttgtttccactccaagtaaa
gtgacagctgcagctatgcctggaaataagtcaacccccagggctagtatccgcccaatg
gttacacctgccaccgttacaaatcctactactaccccaacagctacagtgatgcccacc
acacaggtggaatcacaagaagctatgcagtcagaaggtccagtggaacatgttccagtt
tttggaagcacaagtggatctgttcgttctactagtcctaatgtccagccttctctctct
caacccattttaactgttcagcaacaaacacaggctacagcttttgtgcagcccactcaa
caaagtcatcctcagattgagcctgcaaatcaggagttatccccaaacttagtagaagtg
gttcagagttcaccagttgagcgaccttctacttctacagcagtatttggcactgtttca
gccacccccagttcctctttgccaaagcgcagccgtgaggaggaggaggatagcactgtg
gaagcatcagaccctgtctctgatgatgcagtggaaatgcctcttccaaagaagctgaag
agtgttacacctgtaggtactgaggaagaagttatggcagaagaaagtactgatggagaa
gttgagactcaagtatacaatcaggattctcaagattccattggagaaggagtcacccag
ggagattatacacctatggaagacagtgaagaaacttcccaatctctacaaatagatctc
ggaccacttcaatcagatcagcaaacaacaacttcatcccaggatggccaaggcaaagga
gatgatgtcattgtaattgacagtgatgatgaagaagatgatgatgatgaaaatgatgga
gaacatgaggattatgaagaagatgaagaagatgatgatgatgatgaagatgacacaggg
atgggagatgaaggtgaagacagtaatgaaggaactggtagtgcagatggtaatgacgga
tatgaagctgatgatgctgagggtggtgatgggactgatccaggtacagaaacagaagaa
agtatgggtgcaggtgaaagtaatcagagagctgctgattcccaaaacagtggtgaagga
aatacaggtgctgcagagtcatcttttccccaggagatttccagagaacagcagccttcc
tcagcatctgaaagacagacccctcgagcacctcagtcaccaagacgcccaccacatcca
cttcccccacgactgaccattcatgctccacctcaagagttgggacctccagttcagaga
attcagatgacccgaaggcagtctgtaggacgtgggcttcagttgactccaggaataggt
ggaatgcagcagcacttttttgatgatgaagacagaacagttccaagtaccccaactctt
gtggtaccacatcgtactgatggatttgctgaagctattcattccccacaggtagctggt
gttcctaggttccggtttgggccacctgaagatatgccacagacaagttctagtcactct
gatcttggccaacttgcttctcaaggaggtttaggaatgtatgaaacacccctcttccta
gctcatgaagaagaacctggtggtcgaagtgttcccactactcctctgcaagtagcagcc
ccagtaactgtatttactgagagtaccacctctgatgcttcagagcatgcctctcagtct
gttccaatggtgacgacatccacgggcactttatctacatcaaacgaaacagcagctggt
gatgatggagatgaagtatttgtggaagcagaatctgaaggtattagttcagaagcaggc
ctagaaattgatagtcagcaggaagaagaacctgtgcaggcatctgatgagtcagacctc
ccttccaccagccaggatcctccttccagttcttctgtagatactagcagtagtcagcca
aagcctttcagacgagtgagacttcagacaacactgagacaaggtgtccgaggtcgtcag
tttaacagacagagaggtgtaagccatgcaatgggaggaagaggaggaataaatagagga
aatattaattaa
DBGET
integrated database retrieval system