Marmota marmota marmota (Alpine marmot): 107147685
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Entry
107147685 CDS
T09644
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107147685 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107147685 (Prpf4)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107147685 (Prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107147685
NCBI-ProteinID:
XP_015347666
Ensembl:
ENSMMMG00000001443
UniProt:
A0A8C5YM14
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MASSRASSTAPKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
DSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTISLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacgagcttcctccacggcacccaaaactaaagcacccgacgacttagtg
gctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagagaa
cgtctggccaaaggagagtctggcattttgggtaaagaaggactgaaagcaggaattgaa
gcaggaaatattaatataacctctggagaagtatttgaaattgaagagcacatcagtgaa
cggcaggcagaagtattggctgagtttgaaagaaggaagagagcccggcaaatcaatgtt
tccacagacgactcagaggtcaaggcttgccttagagccttaggggaacccattacactt
tttggagagggccctgctgaaagaagagaaagattaagaaatatcctctcagtggttggt
actgatgccttaaaaaagacaaaaaaagatgatgagaaatctaagaaatccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaatagcctgaaggtggccaggctgtggatt
gctaattattcactgcccagggcaatgaaacgcttggaagaggcccgtctccataaagag
attcctgaaacaactaggacatcccagatgcaagagctgcacaaatctctccggtctctg
aataacttctgcagtcagattggggacgatcggcctatctcctactgtcactttagtcct
gattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaacctccttcacacacttagaggccataacacaaatgtaggcgcaattgtattc
catcccaagtctacaatctcattggaccaaaaagatgtcaacctggcctcttgtgctgct
gatggttctgtgaaactttggagtcttgacagtgatgaaccagtggcagatattgaaggc
cacacagtacgtgtggcccgagtgatgtggcatccatcaggacgtttcctgggcactacc
tgctatgaccgttcatggcgcttatgggatttggaagctcaagaagagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgtgtttgggacctacgcacaggacgttgtatcatg
ttcctagaaggccacctgaaggaaatctatggaataaatttctcccccaatggctaccac
atcgcaactggcagtggtgacaacacttgcaaagtgtgggacctccgacaacgacgttgc
gtgtataccatccctgcccatcagaatttagtgactggagtcaaatttgaacctatccat
gggaacttcttgctcactggtgcctatgataacacagccaagatctggacccacccaggc
tggtccccattgaagactttggctggccatgaaggcaaagtgatgggtctagacatttct
tctgatggacagcttatagccacctgctcatatgacaggaccttcaagctctggatggct
gaatag
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integrated database retrieval system
