Marmota marmota marmota (Alpine marmot): 107147702
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Entry
107147702 CDS
T09644
Symbol
Shoc1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107147702 (Shoc1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107147702 (Shoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
107147702
NCBI-ProteinID:
XP_015347688
Ensembl:
ENSMMMG00000002235
LinkDB
All DBs
Position
Unknown
AA seq
1508 aa
AA seq
DB search
MFPALKYCAIDYLYESVVRKKFSRDALLLRIPSCFSQGENYARLTDDKYRRPWTRVSAVS
VWGMTDSSILDQWKAGFFVEDFLEKNTVTGMVYQVNGEFEEIVPSSNPNSQTEVEEESFY
THKDYNEVFTPVKCSEKCPALQAQNKDLFIDDEELIFINDLATLKSQLPTLKTLLSRLKL
FLIKDPLLDFKEQIFKEANLFRKYFSFQEDLEVCVKEDFYMDKENFCEEKLDDEVGLNEP
PTFPSEFESLISSSFKQEIDIQPTSELKESLTIVPEIKNCIDENEQQFKRDLTTKHGIDI
DDIKRSSTEISGIQSQSEPECNKSGELEIPLTRVHLTSQLSSVNSLCTGLETFPFSSVCK
ISLLITEESANKYCMVWQLESCKSSLNSFLHTALRIQEPNSQYSITDFKKVFSIKEESLA
INPVKAEWWKPARLNLAIGETLEHLNTYVCHDDQSSNDTKMEIFLPKKVLQLESWLDHKN
CSSPTVLTNEKSINDNMLLPQKSPSLTKEVPDLCWSDEYVSVERPKKEEKLKNDQELVDR
TIQKKDNKDHVERDCMVPSNESSSSSRIKIASFEPSKKLENDLDLLSNFIVLRNKYKTCT
SKPEVIDHDKKDDKEEYSTTLQEQSPVVSINKTPEKINEKREVDDVLEVQASDSQCQAYY
FLEAAAAPILKKLVCLCALSANWKFATVIFDQTRFFLKEQEKILSDAIHQGTNDEREMTY
KHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDAYKSILGSYLDDIWRQLKIIQIIRAKK
PEANYKIQELQCQIQSWMQNQQIKVLIILRMDSDGEKHSLIKMLNKIEGLILTISHSNKR
RDFLESKDVLNGASSCVIVHNKNIGADFPWSNFSVVMEYNYVEHSCWSKHCKILNIPYMA
FKVILPDTVLKRSILPDRFGGFLLEIQIPYVFFASEGILNTPELLQLLESNYNITLMERP
CSESLKLFGTKESYVVVTIDEQTAIILQDLEELSYEKASDNIIMRLMALSFQYSYCWIIL
YTKEILNSEYHLTEKTLHHLALIYAALVSSGLKSEELDVKLIIAPGVEETALIIRQIADH
NLMTSKKDPCEWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLNWLLLATACQ
LQDLLPEVPEKVLKHFCSITSLFKISSSSTTKSPQISSPLEESNQTSTFIPQSSSLVSSD
SVIQEYNEYYPYADLRERVQEDTNTTSNYNSSLMELREMPDILPSVTSYNQTNYWKGSSC
SPNIVQNNPCPDNIESKKTALYSFPNQKDSKSDVFSLSLTQINCETTISPIDTQRRVAPN
FINYQKKGAREVKGTTYKEVSAPVLSLEGSQLFPRWNLQRNVYEKQDHSFNLKYGAEQTT
HDKWYTHKDNLFTNQQKRLSDELEGFTCESSNAVTKKTLWRESPPVSSFDLFCASDSNMN
KEFNSLYFYQRAGKSLGQKRQLESSSYVEVKDTLAGLMCSQPSPLKKRRLMYEKVPGRID
GQTRLKFF
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagctttgaaatattgtgcaatagactatttatatgagagtgtagttagaaag
aagttttccagagatgctttattgcttcgaatcccttcatgtttctctcaaggtgaaaat
tatgcacgacttactgatgataaatataggcggccatggacaagagtctcagcagtttca
gtttggggaatgacagacagctcaatcttggatcaatggaaagcaggtttctttgtggaa
gatttccttgagaaaaacacagttacaggaatggtataccaagtaaatggtgaatttgaa
gaaattgttccaagttcaaatccaaactcccaaactgaagtagaagaagaaagcttctac
actcataaggattacaatgaagtctttacacctgttaagtgttcagaaaaatgtccagca
cttcaggcacagaacaaagatttatttattgatgatgaagaattaatttttataaatgat
ttggcgacccttaaaagtcaactaccgactttaaagactctcttgagtagactaaaactc
tttttgataaaggacccccttttagatttcaaagagcagattttcaaagaagctaatctt
ttcaggaaatatttctcttttcaagaagatttggaagtttgtgtgaaagaagatttttat
atggataaagaaaacttttgtgaggagaaactagatgatgaagtaggtttaaatgagcca
ccaacttttccttctgagtttgaatccttaatatcttcaagcttcaaacaagaaattgat
attcaaccaacctcagaactgaaggagtcactaaccatagtaccagaaataaaaaattgt
atagatgaaaatgaacaacaattcaaaagagatcttactaccaaacatggaattgatatt
gatgatataaaacgtagctccacagagatttcaggcattcaaagccagagtgaaccagag
tgcaataaatcaggagaattagaaataccactaactcgtgtacacctaacaagtcaactt
tcttcagtaaattcattgtgtacaggacttgagacatttccattttcttctgtttgtaaa
attagtttgcttattactgaagaatcagctaataaatactgtatggtatggcaattagaa
agctgtaaaagctctttgaactcatttttgcatacagcactaagaattcaagagccaaac
agtcaatattcaattacagattttaaaaaggtattttccatcaaagaagaaagccttgcg
attaatcctgtaaaggcagaatggtggaaaccagcaagactaaatctagcaataggagaa
actttggaacatctaaatacatatgtgtgtcatgatgatcaatcttctaatgatactaaa
atggagatatttttgcctaaaaaagtgcttcaattggaatcatggctagaccataaaaac
tgttcctcgccaactgtacttactaatgagaaatctataaatgataatatgttgcttcca
caaaagagcccatccctgacaaaagaagtaccagatctgtgttggtctgatgaatatgtc
tctgttgaaagaccaaaaaaggaagaaaaactaaagaatgatcaggagctagttgataga
acaatacaaaagaaagacaataaagatcatgttgaacgtgactgcatggtgccatccaat
gaatcatcttcctcttcaagaattaagatagcatcttttgagcctagtaaaaaactggag
aatgatctggaccttttgagcaactttattgtgctgcgaaataaatacaagacttgcacc
tcaaagcctgaagtcatagaccatgataaaaaagatgataaagaagaatattctacaact
cttcaagaacaaagtcctgttgtttccattaataaaactccagagaaaataaatgagaaa
agggaagtggatgatgtccttgaagttcaagcatcagatagccaatgccaggcatactat
ttcctagaagcagccgctgctcctatcttaaaaaaacttgtatgcctctgtgccctctca
gctaattggaaatttgccactgttatttttgaccaaacaaggttctttttaaaggaacaa
gaaaaaatactaagtgatgccattcaccaaggtacaaatgatgaaagagaaatgacatac
aagcatgctgctctcttacaccttctggtaacaattagagatgtccttttaacatgcagc
ttggacacagcattgggatacttgtcaaatgcaaaagatgcctacaaaagcattttaggt
tcctatttggatgacatttggagacagctcaagattatacagattattagggcgaaaaag
cctgaagcaaattataaaatacaagaactgcaatgccagatacaaagttggatgcaaaat
cagcaaattaaggtgctgattatactaagaatggattcagatggtgaaaaacattcactc
attaaaatgcttaataaaatagaaggtttaatattgactatctctcattcaaataaaaga
agagattttctggaatctaaagatgttttaaatggtgcaagttcctgtgtgattgtacat
aataaaaatattggagcagatttcccctggagcaatttctcagttgtgatggaatacaat
tatgtagaacactcttgttggtctaaacactgcaaaatattgaatattccttatatggcc
tttaaagtgattcttccagacacagttttaaagagaagcatcttgccagatagatttggt
ggttttcttcttgaaatccagattccatatgtgttttttgcatctgaaggaattcttaat
actccagaactacttcagctgctagaatctaactacaatatcacactcatggagagaccc
tgcagtgagtcattgaaactctttggaaccaaagaaagttatgtagtggtgacaattgat
gaacagactgccataattttacaggacctagaagaattgagttatgagaaggcatcagac
aatatcattatgagattgatggcattatcgttccagtacagttattgttggatcatatta
tataccaaagaaatattaaattcagagtaccatcttacagaaaagacacttcatcaccta
gcactgatttatgcagctttggtttcctctgggcttaaatctgaagaactggatgtaaag
cttataattgccccaggagtagaagagactgcattaataattcgacaaattgctgaccac
aatttgatgacctcaaagaaagatccttgtgaatggttggataaatcctggcttgaagtt
tcaccatctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggct
cagcttatgttaaataaagggccttcactgaattggttattattagcaactgcatgtcaa
cttcaggacctcctacccgaagttccagaaaaagtgttaaagcatttttgtagcattact
tccttattcaagattagttcttcctccacaacaaaatcacctcaaatttcatcacctctg
gaagagagtaatcagactagtacctttattcctcagagttcatctttggtctcttcagac
tctgtaattcaagaatataatgaatattacccatatgcagacttaagagagagagtgcaa
gaagacacaaataccacttcaaattataactcttctcttatggaactaagagaaatgcca
gatattttgccatctgtgacttcttacaatcagactaactattggaaaggctccagttgt
agccccaacatagtgcagaataatccttgtccagataatatagaatcaaagaaaacagct
ctttactcctttccaaaccagaaagattccaagtcagatgtcttttctttgagcctaaca
caaataaattgtgaaactacaatatcaccaattgatactcagagacgagttgcccctaat
tttataaattatcagaaaaagggagcacgtgaagtcaaaggaaccacatataaagaagta
tctgctccagtcctttcactggagggctctcaactgtttcctcgttggaacttacagaga
aatgtatacgaaaaacaggatcactccttcaacttaaaatatggagcagagcagactacc
catgacaaatggtatactcacaaagataatttattcactaatcagcaaaaacggctttca
gatgaattagaaggcttcacatgtgaaagttcaaatgctgtgactaaaaagactttatgg
agagaatcgcctcctgtttccagttttgatttattctgtgcttctgattctaatatgaat
aaagaatttaatagcctttatttctaccaaagagctggaaaatctttaggacagaaaagg
caacttgaatcttcatcttatgtggaagtcaaggatactttagcaggtttaatgtgctca
cagccatcaccactcaaaaaacgacgtctaatgtatgaaaaagtccctggaagaatcgat
gggcaaacccggctaaagtttttttga
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integrated database retrieval system
