Marmota marmota marmota (Alpine marmot): 107147857
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Entry
107147857 CDS
T09644
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107147857 (Aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107147857 (Aptx)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
107147857 (Aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
107147857 (Aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
107147857 (Aptx)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107147857 (Aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107147857 (Aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107147857
NCBI-ProteinID:
XP_015347943
Ensembl:
ENSMMMG00000008805
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MKLQPGQVLYMVNELYPYIVEFEEEAKNPGPETHRKRKRSGNGNSVERDAVQEAEPGTGV
ESGSSPRPCSMAPEKEKDASNKKDSLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKA
RHHWLVLPWASISSLKDVTREHFELLKHMHTVGEKVIADFAGSSKLRFRMGYHAIPSMSH
VHLHVISQDFDSPCLKNKKHWNSFNTEYFLESEAVIKMVQESGRVTVRDGMSELLKLPLR
CHECQQLLPTIPQLKEHLRRHWTK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcagcctggtcaggttctctacatggtgaatgaactttatccatatattgta
gagtttgaggaagaggccaagaaccctggcccagaaacacacaggaagagaaagaggtca
ggcaatggtaattctgtagaaagggatgctgtccaggaagctgagcctgggacaggggtg
gaatctgggagcagccccagaccatgctctatggcccctgaaaaggagaaagatgcatct
aacaaaaaggactcactgggccattggagtcaaggcttgaaaatttctatgcaggacccc
aaaatgcaggtttacaaagatgagcaggtagtggtgattaaggataaatatcctaaggct
cgtcatcactggctggtcttaccatgggcctccatttccagtctgaaggatgtgactagg
gaacactttgaactcctcaagcacatgcacactgttggggaaaaggtgattgcagatttt
gctggatctagcaaactccgcttcagaatgggctaccatgccattcccagcatgagccat
gtacacctacatgtgatcagccaagattttgattctccttgccttaaaaacaaaaaacat
tggaattctttcaatacagaatacttcctagaatctgaagctgtgatcaagatggtacaa
gagtctggcagagtgactgttcgagatgggatgtctgagctcttgaaactgccccttcgt
tgtcatgagtgccagcagctactgcctaccattcctcagttgaaagagcatctcaggagg
cactggacaaagtga
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integrated database retrieval system