Marmota marmota marmota (Alpine marmot): 107147860
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Entry
107147860 CDS
T09644
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107147860 (Topors)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107147860 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmma03037
]
107147860 (Topors)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107147860 (Topors)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107147860 (Topors)
UBL E3 ligases
107147860 (Topors)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107147860 (Topors)
Cilium and associated proteins [BR:
mmma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107147860 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
PWI_Topors
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
107147860
NCBI-ProteinID:
XP_015347948
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGSQQQPGSPLSREEGEAPPPTPAPEGRRRSRRVRLRGSCRHRPSLLRRGELASSAAAGP
APASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPEVRRFR
YRTTMTRERNVSVYSPSSTMNRRTTTPPDSGVLFEGLGISSRSRGVEIPQLMRQISLRQS
TADERPLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPWL
KRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFAR
SPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDETETQELDINVATVSQAPWDDET
PGPSYSSSEQVHVAMSSLLNTSDSSDEELITEGATSQIQGVQTNEDLNNDSDSSSDNCVI
VGFVKPLAERTPELVELSSDSEELGSYEKIETGKTQEQEHSYSTGDSDVSRCSSPRSILG
KDEQMNKSHCDSGTRIKSRKEEKRSTSLSSPRDLSSSMRGDRVYSPYNHRHRKRGRSRSS
DSRSQSRSGHDQRNHRRHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTL
SLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSY
RRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSNRSRTA
STGPDRVRNEKPGGKRKYKTRHLEGTNEVAQPSRDFASKVKDSHYQKSTSKLDGNYKNES
DSFSDSRSSERETKPKKRKRRTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHRKHHGDN
ISRSPVVITIDSDSDKDSEVKADMEECDNNCPQDPLQNEFLAPSLEPFETKDVVTIEDEF
GVLDKECDITTLTNNLNNANKTVDNIPPQPTSVEQTLDVREESTFASDLENQPSSVVSIQ
TEPSRQLPSPRTSLMSLSLHRD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagcagccagggtctccgctgtctcgcgaggagggtgaagcgcccccg
cctactcccgcaccggagggtaggcggagaagtcgccgggtacgccttcgtggatcttgc
cgtcaccgacctagcctcctccgccgtggggagcttgcttccagcgccgcagccgggcct
gcgccggcatcttccgagataatggcatcagctgctaaagaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgctgctta
cacaagttctgttttcgctgtgttcaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctatttttcattctgtgagggcagaagatgacttcaaggag
tatgtcctaagaccttcatataatggttcttttgccacccctgaagttcgacgatttcgc
taccgaacaacaatgacaagggaaagaaatgtttctgtttattcacctagtagtaccatg
aatagaagaacaactactccaccagatagtggagtgctgtttgaagggttaggcatttca
tcaagatctagaggtgttgaaattcctcaacttatgagacagatttcattaaggcaatct
actgcagatgaaaggcctttgcggaaaattcaagaacaagatattattaattttagacga
actctctatcgcgctggtgctcgagttagaaatatagaagatggtggccgctatagggat
atttcagctgaatttttccgtaggaatccagcttgtcttcacaggttagtcccttggtta
aaacgtgaacttacagttctttttggagctcatggatctttagtcaatattgtccagcac
atcatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgattta
agaccatttttacttaatcgaactgagcattttatacatgagtttatcagttttgctcga
tctccttttaacatggcagcttttgaccaacatgctaattatgattgccctgctccatca
tatgaagaaggtagccattctgattcttcagtcataacaatatctccagatgagactgag
acccaagagctggatattaatgtagccactgttagtcaggcaccttgggatgatgaaact
ccaggaccatcttactcaagctcagagcaggtacatgttgccatgtcttcccttttaaat
acttctgacagttcagatgaagaacttatcacagaaggagccacgtctcagatacaagga
gtacaaaccaatgaagacctaaataatgacagtgattcttcttcagataattgtgtcatt
gttgggtttgttaaaccactagctgagaggacgccagaacttgttgaactgtcctcagat
tctgaggagttaggctcttatgagaaaatagaaacagggaagacacaagaacaagagcac
tcttacagtactggtgatagtgatgttagtagatgttcatctccacgctctattcttgga
aaagatgagcaaatgaataaaagtcattgtgattctggtacaagaatcaaatcaaggaag
gaagagaaacgatctacatcattgtcatctcctagagacctgagctcatctatgagagga
gacagagtatattccccgtataaccatagacacagaaagaggggaagatccagaagttcg
gattctcgttcccagagtagaagtgggcacgatcagaggaatcatagaaggcatcatggg
aagaaaagaatgaagagcaaacgatccagaagcagggagagtagcagacctagaggaaga
agagacaaaaagagatcaagaactagagatagcagttggtcaagaagaagccaaactctt
tctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgatcatggcaaaaga
agatcacggagcagaaatagagatcgctattatttaagaaataattatggaagcagatat
aagtgggagtatacatattacagtagaaacaaggacagggacggttatgaatcgtcttac
agaaggaggactctgtccagagcccattattctagacaatcttcaagtccagaatttaga
attcagtccttttctgaaagaacaaatgctaggaaaaagaataatcacagtgaaaggaag
tattattattatgaaaggcacagatcgaggagcctttctagtaataggtcaaggactgca
tctacagggcctgaccgggtgagaaacgaaaagcctggagggaaacgaaaatacaaaaca
cggcatttggagggtactaatgaagttgctcaaccatctcgtgactttgcttctaaagta
aaggacagtcattaccaaaaatctacatcaaaattggatggaaattacaaaaatgagagt
gacagcttttcagacagccgatcatcagagagagaaacaaaacctaagaaaagaaaaaga
agaacccggagcttaagtgtagagatagtctatgaagggaaagctaccgatacaactaaa
catcataaaaagaaaaagaagaaacataagaagaagcataggaaacatcatggcgataat
atttcacgttccccagttgttattactattgacagtgatagtgataaagattctgaagtg
aaggcagatatggaagaatgtgacaataattgtcctcaagaccctttacaaaatgagttt
ttggctccttccttggaaccatttgaaactaaagacgtagtcacaatagaagatgaattt
ggtgtcctggacaaggagtgtgatatcaccacacttaccaacaacttgaataatgccaat
aagactgtggacaatattccgccccagccaacttcagttgaacaaactcttgatgtaaga
gaagagagcacctttgcctccgatttggaaaaccagcccagtagtgttgtatctattcaa
actgagccatcaaggcaattgccatctccacggacatcattaatgtcattgtctctccat
agagattga
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