Marmota marmota marmota (Alpine marmot): 107148068
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Entry
107148068 CDS
T09644
Symbol
Ebf1
Name
(RefSeq) transcription factor COE1 isoform X2
KO
K09103
early B-cell factor
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107148068 (Ebf1)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107148068 (Ebf1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
107148068
NCBI-ProteinID:
XP_015348148
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLK
CNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAT
PCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITPHAIRVQTPPRHIPG
VVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVILKR
AADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALANTSVHTGMMGVNSFSG
QLAVNVSEASQATSQGFTRNSSSVSPHGYVPSTTPQQTNYNSVTTSMNGYGSAAMSNLGG
SPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFAPV
VRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaagccatagtgtatgaaggccaagacaagaaccccgaaatgtgccgagtc
ttgctcacacatgagatcatgtgcagccgctgttgtgacaagaaaagctgtggcaaccga
aatgagactccctcagatccagtgataattgacaggttcttcttgaaattttttctcaaa
tgcaaccagaattgcctaaagaatgcgggaaacccacgtgacatgcggagattccaggtt
gtggtgtctacaaccgtcaacgtggatggccatgtcctggcagtctctgataacatgttt
gtccataacaactccaagcatgggcggagggctcggaggcttgacccctcggaagctact
ccctgtatcaaagccatcagccccagtgaaggatggaccacgggaggcgcgactgtgatc
atcataggggacaatttctttgatgggttacaggtcatattcggtaccatgctggtctgg
agtgagttgatcactcctcatgccatccgtgtgcagacacctccgcggcacatccctgga
gttgtggaagtcacattgtcctataaatccaagcagttctgcaaagggacaccgggcaga
ttcatttacacagcactcaatgaacccaccattgattacggcttccagaggttacagaag
gtcattccacggcaccctggtgaccctgagcgcttgccaaaggaggtgatactcaaaagg
gctgcagatctggtggaagcgctgtacggcatgccacacaacaaccaggaaattattctg
aagagagcagctgacattgcagaggccctgtacagtgttcctcgcaaccacaaccagctc
ccggcccttgctaacacctcggtccatacagggatgatgggcgtgaattccttcagtgga
caactggccgtgaatgtctccgaggcatcacaagccaccagtcagggtttcacccgcaac
tcaagcagcgtgtcaccacatgggtacgtgccgagcaccaccccccagcagaccaactat
aactctgtcaccacgagcatgaacggctacggctctgccgccatgtccaatttgggcggc
tccccaaccttcctcaatggctcagctgccaactcgccctatgccatcgtgccatccagc
cccaccatggcctcctccacaagcctcccctccaactgcagcagctcctcgggcatcttt
tccttctcaccagccaacatggtctcagccgtgaaacagaagagtgctttcgccccggtc
gtcagaccccagacctccccgcctcccacctgcaccagcaccaatgggaacagcctgcaa
gcgatatctggcatgattgttcctcccatgtga
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