Marmota marmota marmota (Alpine marmot): 107148206
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Entry
107148206 CDS
T09644
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107148206 (Tmc1)
03037 Cilium and associated proteins [BR:
mmma03037
]
107148206 (Tmc1)
Transporters [BR:
mmma02000
]
Other transporters
Pores ion channels [TC:
1
]
107148206 (Tmc1)
Cilium and associated proteins [BR:
mmma03037
]
Other cilia and associated proteins
Stereociliary proteins
107148206 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
107148206
NCBI-ProteinID:
XP_048662737
Ensembl:
ENSMMMG00000011802
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MPPKKVKIQVEEKEDDTEESSSEEEEEKLPRRESLRPKRKRTRDVINEDDPIPEPEDEET
RKAREKERRRRLKRGAEEEEEIDAEELERLKAELDEKRQIIATVKCKPWKMEKKIEVLKE
AKKFVSENEGALGKGKGKQWFAFKMMMTKKWAKFLRDFENFKAACIPWENKIKAIESQFG
SSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGV
LYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLRAMTKNIGD
DGGGDDNTFNFSWKMFCSWDYLIGNPETADNKFNSITMNFRHGVHRGKEEMFCGDNKPVP
LTWSIPHVSMQMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVF
ILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLSENTTGPPFFVHPADVPRGPCWE
TMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNV
LALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYL
GMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLENDFPSWMAKILRQLS
NPGLVIAVVLVMGLTIYYLNATAKGQKAANLELKKKMKLQALENKMRNKKMAAARAAIAA
GGQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaaaagtgaaaatccaagttgaggaaaaagaagatgataccgaggaaagc
tcaagtgaagaagaagaagaaaagctacctagaagagagagtttgagaccaaagaggaaa
cggaccagagatgttatcaatgaggatgacccaatacctgaaccagaggatgaagaaaca
aggaaggcaagagaaaaagaaagaaggaggaggttgaaaagaggagcggaagaagaagag
gaaattgatgcagaggaattggaaagactgaaggcagagttagatgaaaagagacaaata
attgcgaccgttaaatgcaaaccttggaagatggagaagaaaattgaagttctcaaggaa
gcaaaaaaatttgtgagtgaaaatgaaggagctcttgggaagggaaaaggaaagcagtgg
tttgcctttaagatgatgatgactaagaaatgggcaaaattccttcgtgattttgagaat
ttcaaagctgcttgtatcccatgggaaaataaaatcaaggcgattgaaagtcagtttggc
tcatcagtggcctcctacttccttttcttgagatggatgtatggagtaaatatggttctt
tttatcctgacgttcagcctgatcatgttgccagagtacctctggggtttgccatatgga
agtttacctaggaaaacagtcccaagagctgaagaggcatctgcagccaactttggtgtt
ttgtacgacttcaatggtttggcacaatattccgtcctcttttatggctattacgacaat
aaacgaacgattggatggatgaatttcaggttgccgctctcctattttctggtggggatt
atgtgcatcggatacagctttctggttgtcctcagggcgatgaccaaaaatattggtgac
gatggagggggcgatgacaacactttcaacttcagctggaagatgttctgcagctgggac
tacctgattggcaaccccgaaacagccgacaacaaatttaattccatcacaatgaacttt
aggcatggagtccacaggggaaaagaggagatgttttgtggtgacaataagccagtacca
ttaacctggtccattcctcacgtctccatgcagatgaatatggttatgtccctcctgggg
atgttctgtccaacactgtttgacttatttgctgaattggaagactaccatcctctcatc
gctctgaaatggctcctgggacgcatttttgctctccttttaggcaacctgtatgtattt
attcttgccttaatggatgagattaacaacaagattgaagaggagaagcttgtgaaggcc
aacatcaccctgtgggaagccaacatgatcaaggcctacaacgcatccctctctgaaaat
accaccgggccaccattttttgttcatcctgcagatgtacctcgaggaccgtgctgggaa
accatggtgggacaggaattcgtgcgactgaccgtttctgatgttctgacgacttatgtc
acaattctcatcggtgactttctcagggcatgttttgtaaggttttgcaattactgctgg
tgctgggatttggaatatggatatccttcctacaccgaatttgacatcagtggcaacgtc
ctggctctgatcttcaaccaaggcatgatctggatgggctccttcttcgctcccagcctc
ccgggcatcaatatccttcgactccacacatctatgtacttccagtgctgggccgtgatg
tgctgcaatgttcctgaagccagggttttcaaagcttccagatcaaataatttctacctg
ggcatgcttttgctcatcctcttcctgtccaccatgccggtcctgtacatgatcgtatct
ctcccaccatcttttgattgtggtcccttcagtggcaaaaacaggatgttcgaagtcatt
ggtgagaccctggagaatgatttcccaagctggatggcaaagattttgagacagctttcc
aaccctggactggtcattgctgttgttctagtgatgggtttgaccatctattatctcaat
gccactgccaagggccagaaggcagcaaatctggaactaaaaaagaagatgaaactgcaa
gctttggaaaacaaaatgcgaaacaagaagatggcagccgcacgtgcagctatagctgct
ggtggccagtaa
DBGET
integrated database retrieval system
