Marmota marmota marmota (Alpine marmot): 107148249
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Entry
107148249 CDS
T09644
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma05017
Spinocerebellar ataxia
mmma05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
107148249 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
107148249 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107148249 (Vldlr)
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107148249 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
107148249
NCBI-ProteinID:
XP_015348367
Ensembl:
ENSMMMG00000002594
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MGTSARWALWLLLALCWAPADSGATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCN
DGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGGCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQKGTLQLFLSTSTTVAYSETKDANTKEIPPT
SGLVPGGINVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNF
DNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgttgctcgcgctgtgctgggcgcccgcg
gacagcggcgccactggagccggcagaaaagccaaatgtgagccctcccaattccagtgc
accaatggccgctgtataaccctgctgtggaaatgtgatggagatgaagactgtgtcgac
ggcagtgatgaaaagaactgtgtgaagaagacatgtgcagagtctgactttgtgtgcaac
aatggccagtgtgttcccaaccggtggcagtgtgatggggatccagactgtgaagatggt
tctgacgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacataacatgtagcccagatgagttcact
tgctccagtggtcgctgcatctccaggaactttgtgtgcaatggccaggatgactgtaat
gatggcagcgatgagctggactgtgccccacctacctgcggtgcccatgagttccagtgc
agcacctcctcctgcatccccattagctgggtatgtgatgatgatgcagactgttcggac
cagtcagatgagtcccttgagcagtgtggccgccagcctgttatacacaccaagtgcccg
gccagcgagatccaatgtggctctggcgagtgcatccacaagaaatggcgatgtgatggg
gaccccgactgcaaagatggtagtgatgaggtcaactgtccttctcgaacctgcagacct
gaccaatttgaatgtgaggatggcggctgtatccatggcagcaggcagtgtaatggcatc
cgagactgtgttgatggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggc
cctggaaaattcaagtgcagaagtggggaatgtatagacatcagcaaagtgtgtaaccag
gagcaggactgcagagactggagtgatgagcccctgaaagaatgtcatgtcaatgaatgc
ttggtaaataatggtggatgttcccatatctgcaaagacctagttataggctacgaatgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgatgaatgc
caaaatccgggaatctgcagtcaaatttgtatcaacctaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagaa
ccaagtctgatcttcactaatagaagagacatcaggaagattggcttggagagaaaagaa
tatatccaacttgttgaacagctaagaaatactgtagctcttgatgctgacattgctgct
cagaaactgttctgggctgatctcagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagacggaaccaagaggaagttcctgtttaactccgacttacgagaacctgcctcc
atagccgtcgacccattgtctggctttgtttactggtcagattggggagaaccagctaag
atagaaaaagcaggaatgaatggatttgaccgacgtccgctggtgacagccgatatccag
tggcccaatgggattacgcttgatcttataaaaagccgcctctattggcttgattccaag
ttgcacatgttgtccagtgtggatttgaatggccaagaccggaggatagtactgaagtct
ctggagttcctggctcatcctcttgcactaacaatatttgaggatcgcgtctactggata
gatggggaaaatgaagcagtttatggtgccaataaattcactggatcagagctggctact
ctagtcaacaaccttaatgatgctcaagacatcattgtctatcatgaacttgtgcagccc
tcaggtaaaaattggtgtgaagaagatatggagaatggaggatgtgaatacctatgcctg
ccagcaccacagattaatgatcactctccaaagtatacctgttcctgtcccaatggctac
aatctagaggaaaatggacgagagtgccaaaaaggcacactgcaattattcttaagtact
tcaactactgtggcttacagtgagacaaaagatgccaacacaaaagaaattccaccaacg
agtggactagttcctggagggatcaatgtgaccacagcagtatcagaggtcagtgttccc
ccaaaaggaacatctgctgcctgggccatccttcctctcttgctattggtgatggcggca
gtaggtggctacttgatgtggaggaattggcaacacaagaacatgaaaagcatgaacttt
gataaccctgtgtacttgaagaccactgaagaggacctctcaatagacattggtagacac
agtgcttctgttggacacacgtacccagcaatatcagttgtaagcacagatgatgatcta
gcttga
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