Marmota marmota marmota (Alpine marmot): 107148316
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Entry
107148316 CDS
T09644
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
107148316 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107148316 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmma03310
]
107148316 (Rorb)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107148316 (Rorb)
Nuclear receptors [BR:
mmma03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
107148316 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107148316
NCBI-ProteinID:
XP_048662739
Ensembl:
ENSMMMG00000011844
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MCENQLKTKADATEKCNFFHFLKRSGLALLNDSAENELWMLISSHLLVRICESRHCCLPS
VKVEEKEIRRPKERNCVNSNCFPLSAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRS
QQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEV
QKHQQRLQEQRQQQSGEAEALARVYSSSISNGLSNLSNETSGTYANGHVIDLPKSEGYYS
VDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQ
NIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFA
KRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDD
LVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQ
KNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATV
CK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaactaaagctgatgccactgaaaagtgtaatttttttcat
tttctgaaaagaagtggactcgctcttttaaatgactctgcagagaatgaactctggatg
ctcatctcgagtcatctgttggtccggatttgtgagtcccgccattgctgccttccttct
gtgaaggtggaggagaaagagataagaagaccgaaagaaagaaactgtgtaaactcaaac
tgttttcccctttcagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcc
tctgggatccactacggagtcatcacgtgtgaaggctgcaagggattcttcaggaggagc
cagcagaacaatgcctcttactcctgcccaaggcagagaaactgtttaattgacagaacc
aacagaaaccgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgaga
gatgctgtgaagttcgggaggatgtccaagaagcagagggacagcctgtatgctgaggtg
cagaagcaccagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagcc
cttgccagggtgtatagcagcagcatcagcaacggcctaagcaacctgagcaatgagacc
agcggcacttacgccaacgggcatgtcatcgacctgcccaagtctgaaggttactacagc
gtagactccggtcagccatcccctgatcaatcaggacttgacatgactggaatcaaacag
ataaagcaagaacctatctatgacctcacatccgtacccaacttgtttacctatagctct
ttcaacaacgggcagttagcaccagggataacgatgacagaaatcgatcgaattgcacag
aacatcattaagtcccacttggagacatgtcagtacaccatggaagagctgcaccagctg
gcatggcagacccacacctatgaagaaatcaaagcctatcaaagcaagtccagggaagca
ctgtggcagcaatgtgccatccagatcactcatgccatccagtatgtggtggaatttgca
aaacggataacaggcttcatggaactctgccaaaatgatcagatactgcttctgaaatca
ggttgcttggaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacact
gttctgtttgaaggaaaatatggaggaatgcaaatgttcaaagccttaggttctgatgac
ctagtgaatgaagcatttgactttgcaaagaatttgtgttccttgcaactgaccgaagag
gagattgctttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaa
ccaaggaaggtccagaaacttcaggaaaaaatttattttgcacttcaacatgtgattcag
aagaatcacctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacg
gcagtttgcaacttgcacggggagaagctgcaggtatttaagcaatctcatcctgacata
gtgaatacactgtttcctccattatacaaggagctctttaaccctgactgtgccaccgtc
tgcaaatga
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