Marmota marmota marmota (Alpine marmot): 107148610
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Entry
107148610 CDS
T09644
Symbol
Prpf40b
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X11
KO
K12821
pre-mRNA-processing factor 40
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107148610 (Prpf40b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107148610 (Prpf40b)
Spliceosome [BR:
mmma03041
]
Complex A
U1 snRNP components
U1 related factors
107148610 (Prpf40b)
Complex B
107148610 (Prpf40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
107148610
NCBI-ProteinID:
XP_015348809
Ensembl:
ENSMMMG00000023101
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MMPPPFEAVCLPVKPRELPSYLSFSVMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILP
PMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSE
HVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSQESC
WTRPKDLDDLEALVKQEAAGKMQQPQTPQPQPPQPQPDPPPAPPGPTPMPKGLLEPEPGG
SEDCDVSEAAQPLEQGFLQQPEEGPSSSAGQHQLTQQEEEESKPEPERSGLSWSNREKAK
QAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEAR
LRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAK
KEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDA
LICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELY
PAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFE
DFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQA
VPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRK
GKKHHHKRSHSPSGSESEEEELPPPSLRPPKRRRRNLSESASDPSSSLDSLESGGVALGG
RGSPSSHLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESEEKEQEQDKD
RDLRQAELPNRSPGFGVKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcgaagctgtgtgcttgcctgttaaacccagagaactccccagt
tacctgtctttctcagtgatgccccctccagggatccccccaccctttcctccgatgggg
ctcccacccatgagtcagagaccaccagccatcccccccatgccacctggcatcttgccc
ccaatgcttccaccgatgggggcaccaccaccactcacacagataccaggaatggtacct
ccgatgatgccaggaatgctgatgccagcagtgcctgtcactgccgcgacggctccgggt
gcggacaccgccagctctgctgtggctgggacaggccctccgagggccctatggagtgag
catgtggcccctgatgggcgcatctactactacaatgctgatgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcggagctgctgctgtctcagtgtccctggaaa
gagtacaagtcagacacaggcaaaccttactactataataaccagagtcaggagtcctgc
tggacccggcccaaggacctggatgacctggaggctctagtcaaacaagaggctgcagga
aaaatgcaacagccgcagacaccacagccacagccacctcagcctcagcctgacccccca
cctgcacctcctggccccactccaatgcccaagggcctcctggaacctgagccaggtggg
agtgaagattgtgatgtgtcggaggctgcccagcccctggagcaggggtttctgcagcag
ccagaggagggccccagcagttctgctggacagcatcagctaacacagcaagaggaggag
gaatccaagccagaaccagagaggtctggcctcagttggagcaaccgagagaaggcaaag
caggcattcaaggaactgctgagggacaaggctgtcccctccaatgcctcatgggaacag
gccatgaagatggtagtcacagatccccgatacagtgccttgcccaaactaagtgagaaa
aagcaggcattcaatgcttacaaggcacagcgggagaaggaggagaaggaagaggcccgg
ctaagggccaaggaggccaagcagaccttacagcatttcctggaacagcatgaacgcatg
acctccaccacccgctaccggcgggcagaacagacctttggggaactggaggtctgggct
gtggtcccggagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaag
aaggagaaggaacaggccaagcagctccggcgccgaaatattcaggccctgaagagcatc
ctggatggaatgagtagtgtcaacttccagaccacatggtcccaggcacaacaatacctc
atggataaccccagttttgctcaggaccatcagctgcaaaacatggacaaggaagatgcc
ctgatctgctttgaagagcacatccgagctttggagagggaggaggaggaagagcgggaa
cgggcccgacttcgggaacggcgccagcagcgcaagaaccgggaggctttccagaccttc
ctggatgagctgcacgagacagggcagctgcactccatgtccacctggatggagctgtac
ccagctgtcagcactgatgtccgctttgccaacatgctgggccagccgggctctacccct
ctggacttgttcaagttctatgtggaagagttgaaggcacgatttcatgatgagaagaag
atcattaaggacattcttaaggaccggggcttctgcgtggaggtgaacacagcgtttgaa
gacttcgcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaacatc
aagctgaccttcaatagtctgctggagaaggcagaggcacgggagagggagcgggaaaag
gaggaggcacgaaggatgcggcgcagagaagctgcctttcgaagcatgctgaggcaggcc
gtgcctgctctggagctgggcactgcgtgggaagaggtccgagagcgctttgtgtgcgac
tcagcctttgagcagatcaccctagagtcggaaaggatccggctcttccgggagttcctg
caggtgctggagactgaatgccagcacctccacaccaaaggccgaaagcatggcaggaag
ggcaagaaacaccatcacaagcgttcccactcaccctctggctccgagtcggaagaggag
gagctgcccccaccatccctccggccccccaagcggaggaggcgaaacctctcagagtct
gcctctgatccctcatcctcacttgattcacttgaaagtgggggtgttgcccttggagga
cggggctccccatcctcccaccttcttcttggatcagatcatggccttcggaaagccaag
aaaccaaaaaagaaaactaaaaagagaagacacaagtcgaacagccctgagagtgagaca
gaccccgaggagaaagctggcaaggagagtgaagagaaagaacaagaacaagacaaggat
agggaccttcggcaggcagagctccctaatcgctccccaggctttggagtcaagaaggag
aagacaggctgggacacgtcagaaagcgagctgagtgagggggagctagagaggcggcgg
cggacactcctacagcagctggatgaccaccagtga
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integrated database retrieval system
