Marmota marmota marmota (Alpine marmot): 107149302
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Entry
107149302 CDS
T09644
Symbol
Mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107149302 (Mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107149302 (Mlh3)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107149302 (Mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
107149302
NCBI-ProteinID:
XP_015349577
Ensembl:
ENSMMMG00000018877
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MIKCLSVEVQAKLRSGLTISSLGQCVEELVLNSIDAEATCVAIRVNMETFQVQVIDNGFG
MGIDDVDKVGNRYFTSKCNSLEDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF
VKLFQNGKALKACEADLTRPSAGTTITVHNLFYHLPVRRKCMDPRLEFEKVRQRVEALSL
MHPSVSFSLRNDVSGSMILQLPKSKDICSRFCQIYGLGKSQKLREIHFKYKEFEFSGYIS
SEAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESTICKPKNGSASRQMNSSPRHRSTP
ELHGIYIINVQCQFCEYDVCMEPAKTLIEFQNWDTLLVCIQEGVKMFLKQEKLFVELSGE
DIKEFSEDNDFNLFGATLQKHVFLDEKHDQGGFQEACNNILDSYEMFNLQSKAVKRKATI
ENINTQNSGDSEAIRRKTNGSFLYTYESDGPSHSNMTELSLYNKDSCCLESRMLEQETVE
ISESRESEKHKKSCLEHNSLESPYGISSEMFSSPFQIQHHFEESGVDLEVQKESTTASGM
AANILKNKRIQNQLERFEDATEMGCQSLPFETGLLSIHSAQREKEPSDCGRINVFRYGQV
KLCSTGFITHVLQNEQTKSTEAEHSFKNYIRPGPASAQETFESRTCHSFETPDIKGLTST
LSKESAQLLSKNFCRQNTSYGLENKPRAKCKTVTVFQEGDKESHTGCLLPDISSSFPWCR
QVSNGIKKTDKLIGSSKPVGRKKLSLTSQLGSLEKFKRHYGKVKNPVDTEVEENNIEVIT
NLGPQVKPDTPLKDKNHLENSDVCKITTINCTNSNGSCQPVSHILCSEKFPLSKEDCLEL
QMPYLEESPITLMELSHLNRKPSDVEKSPESLASKLSRLKSSEKEAQTMEIRSHFIELPN
SDSSREDSNLYSGLNLDFCELFKNEPEKTDSSILPRSDTVIEVTEDNSLNEDSELHSGNN
KMENTAKPDTPLELPRSDSKIIAQDSDVLIRASKQQIGSSDSPSGILMNQIEDIIANQNG
ICSWSKKSKGRACSENEESNTCSLDWQQHFDEALGRMVYINKVTGLSTFIAPAKDIQTAC
TKDLTTVAVDVILGNGSQYRCHPFRSNLVLPFLPRAREERTVLRQNNRDAVDDAVGSESL
QSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNK
FIACLMSTKTEENDKAGGNLLILVDQHAAHERIRLEQLITNSYEKQQPHGCGRKKLLSST
IIPPLEITVTEAQRRLLWYYHKNLEDLGLEFIFPDTSNSLVLVGKVPLCFVEREANELRR
GRSTVTKSIVEEFVQEQVELLQATGSIQGTLPLTIQKVLASQACHGAIKFNDSLSLEESY
RLIEALSWCQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLANLRKRAEAWHLFGKAKGC
DARQSLQSVSSCEPP
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtgcttgtcagttgaagtacaagccaaattgcgttctggtttgaccataagc
tctttaggccaatgtgttgaggaacttgtcctcaacagtattgatgctgaagcaacatgt
gtggccatcagggtgaatatggaaaccttccaagttcaagtgatagacaatggatttggg
atggggattgatgatgtggacaaggtgggaaatcgttatttcactagtaaatgcaactcg
ctagaggacttggagaacccaaggttttatggtttccgaggggaggccttggcaagcata
gctgacatggccagtgctgtggaaatttcatccaagaaaaacaggacaatgaaaactttt
gtgaaactgtttcagaatggaaaagccctaaaagcttgtgaagctgatttgactagacca
agtgcagggacaaccataacggttcataacctattttaccatttacccgtgaggaggaaa
tgcatggatcctagactggagtttgagaaagtcagacagagggtagaagctctctcactc
atgcacccttctgtttctttctctttgagaaatgatgtttctggttctatgattcttcaa
ctccctaaaagcaaagacatatgctcccggttttgtcaaatttatggtttaggcaagtcc
caaaagttaagagaaatacattttaaatacaaagagtttgagtttagtggctatatcagc
tctgaagcacattacaataagaatatgcagttcttgtttgtgaacagaagactggtttta
aggacaaagttgcataaacttatcgactttttattaagaaaagaaagtactatatgtaag
ccaaaaaatggttctgccagtaggcagatgaattcaagtcctcggcatcggtctacccca
gaactccacgggatatatatcatcaatgtgcagtgccagttctgtgagtatgacgtgtgc
atggagccagcaaaaactctgattgagtttcagaattgggatactctcttggtttgcatt
caggaaggagtgaaaatgtttttaaagcaagaaaaattatttgtggaattatcaggtgag
gacattaaagaattcagtgaagataatgattttaatttattcggtgctactcttcagaaa
catgtgttcttagatgagaagcatgaccagggcggtttccaggaagcgtgtaataatatt
ttggattcttatgaaatgtttaatttgcagtcaaaagctgtgaaaagaaaggctactata
gaaaatataaacacacagaattctggggattcagaagctatcagaagaaagacaaatggc
tcatttttgtacacttatgaatcagatggccccagtcatagtaatatgacagagttatca
ttatacaacaaagacagttgttgcttagaatcaaggatgttagaacaagagacagttgaa
atatcagaatcaagagaaagtgagaaacataaaaaatcttgcttggaacataactcttta
gaaagtccatatggaatcagttcagaaatgttttcaagcccttttcagatacaacatcac
tttgaggagagtggagtagatttagaagtacagaaagaaagtacaactgctagtggcatg
gctgccaacatattgaaaaacaaaagaattcagaatcaacttgagagatttgaagatgct
actgaaatgggatgccagtctctgccttttgagacaggattattgagcatacatagtgct
cagagagaaaaagagcccagtgattgtggaagaataaatgtttttaggtatggacaagta
aaattgtgttccactggctttataactcatgtccttcaaaatgagcaaactaaatcaact
gaagcagaacattcatttaaaaattatatacggcctggtcctgcaagtgcccaagaaaca
tttgaaagtagaacatgtcattcatttgagactccagacatcaaaggtttaaccagcact
ctaagtaaagaatctgctcaactgctgagcaaaaatttttgcagacaaaatacaagttac
gggctagagaacaaacctagagcaaaatgcaaaactgttactgtttttcaggaaggtgat
aaagaatcacacacaggttgcttattgcccgatatatcctcttctttcccttggtgtaga
caagtttcaaatggtattaagaaaacagataaattgattggttcctccaaacctgtaggc
cgaaagaagctaagcttgacttcacaactaggatctttagagaagtttaaaaggcactat
ggaaaagttaaaaatcctgtagatacagaagtggaagaaaataatattgaagttattacc
aatctcggtcctcaagtcaaacctgacactccactgaaagacaagaaccacttagaaaat
tctgacgtctgtaaaatcactactataaattgtaccaactcaaatggtagttgtcaacca
gtaagtcacatcctgtgctcagagaagtttccactttccaaagaagattgtttggaacta
cagatgccttatttggaagaaagtcctataactctaatggagttgtctcacttgaacaga
aaaccttcggatgttgagaagtcacctgaatcattggcctctaaattatccagattgaag
agctctgaaaaagaggctcaaacgatggagattaggagtcattttattgaacttccaaat
tcagattccagcagggaagacagtaacttgtacagtgggttaaacctagatttttgtgag
ttgtttaaaaatgaacctgaaaaaacagacagcagcatcctcccaaggtcagatactgtc
attgaggttactgaggataattccctcaatgaagacagtgaactgcattcaggcaacaac
aaaatggagaacactgcaaaaccagacactcctttggagttaccccgtagtgattctaaa
attatcgctcaagattcagatgttctcatcagagcttcaaagcaacagataggaagttct
gattctcccagtggaattttaatgaatcagatagaagatatcatagccaaccaaaatgga
atttgttcctggagtaagaagtctaaaggaagagcttgttctgaaaacgaagagtcaaac
acatgttctttggattggcagcagcattttgatgaagccctgggaagaatggtttatatt
aacaaagtcactggacttagcacattcattgctcctgctaaggacattcagactgcttgt
actaaagacctgacaactgtagctgtggatgtcatacttgggaatgggtctcagtacaga
tgtcatccttttagaagcaaccttgttcttcctttccttccaagagctcgggaagagagg
actgtgctgaggcagaataacagagatgctgtggatgatgctgttggtagtgaatccctt
cagtctttgttttcagaatgggacaatccagtgtttgcccgttacccagaggttgctgtt
gatgtaagcagtggccaggctgagagcttagcagttaaaattcacaacatcttatatccc
tatcgtttcaccaaagaaatgattcattcaatgcaggttcttcagcaagtggataacaag
tttattgcctgtttaatgagcactaagactgaagagaatgacaaagcaggtggaaacctg
ctaatcttggtggaccagcacgctgcccatgagcgcatccgtttggagcagcttattacc
aattcctatgagaagcaacaaccacatggctgtggtcgaaaaaaattactatcttccact
ataattcctccactagagataacagtgacagaggcccaaaggagactcctatggtattac
cacaaaaatctggaagatctgggccttgaatttatctttccagacactagtaattctctg
gtccttgtgggaaaagtaccactctgttttgtggaaagagaagccaatgaacttcgaaga
ggaagatctactgtgaccaagagtattgtggaggaatttgttcaagaacaagtggagctg
ctccaggccacaggaagcatccaggggactttgccactgaccatccagaaggtgttggcc
tcccaagcctgccatggggccatcaaatttaatgacagcctgagcctagaagagagctat
cgacttattgaagctctgtcatggtgccagctgccattccagtgtgctcacgggagaccg
tctatgctgccactagctgacctagaccacttggagcaggagaaacaggttaaacccaat
cttgctaatcttcggaaaagggctgaggcgtggcatctctttggaaaagcaaaaggctgt
gatgcaaggcaaagcctgcagtctgtgtcttcttgtgagcccccttga
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