Marmota marmota marmota (Alpine marmot): 107149488
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Entry
107149488 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
mmma05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107149488
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107149488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107149488
03041 Spliceosome [BR:
mmma03041
]
107149488
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107149488
mRNA cycle factors
Common to processing body (P body) and stress granule
107149488
Spliceosome [BR:
mmma03041
]
Common components
Common spliceosomal components
hnRNP proteins
107149488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107149488
NCBI-ProteinID:
XP_048670261
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MFCSAGFLVVNSFDFGLLWKIFISSSNLKLNFAGYKIFGATLTLIRCRVAKWRIGPQWPP
PRCAAEKECGIGGAVRRRPGRNAADGFEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFE
KWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHEVDGRVVEPKRAVSREDS
VKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDD
HDTVDKIVVQKYHTINGHNCKVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNXGGGGGN
FGSGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGY
GNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSS
GSPYGGGYGSGGGSGGYGSRRF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtagtgcaggctttctagttgtaaattcttttgactttggtttattatggaag
atttttatttcatcatcaaatctaaagcttaattttgctggatataagatttttggggcc
acattgacattgatccgctgccgcgttgcgaaatggcgcattggcccgcaatggccaccg
cctcgctgcgccgctgagaaggagtgcgggattggaggagcagtcaggaggcggcccggt
agaaatgccgcagatggcttcgagggccacgatccaaaggaaccagagcaattgaggaag
ctgtttattggtggtctgagctttgaaactacagatgatagtttaagagaacattttgag
aaatggggcacactcacagattgtgtggtaatgagagacccccaaaccaaacgttccagg
ggctttggttttgtgacttactcttgtgttgaagaggtggatgcagcaatgtgtgctcgg
ccacacgaggttgatgggcgtgtagtggaaccaaagagagctgtttctagagaggattcg
gtaaagcctggtgcccatctaacagtgaagaaaatttttgttggtggtattaaagaagat
acagaagaatataatttgagagattactttgaaaagtatggcaagattgaaaccatagaa
gttatggaagatagacagagtgggaaaaagagaggatttgcttttgtaacatttgatgat
catgatacagttgacaaaattgttgttcagaaataccacactattaatgggcataattgt
aaagtgaaaaaggccctttctaaacaagagatgcagtctgctggatcacaaagaggtcgt
ggaggtggatctggcaactttatgggtcgtggaggaaacnntggaggtggtggaggtaac
tttggcagtggtggaaactttggtggaagaggaggctatggtggtggaggtggtggcagc
agaggtagttatggaggaggtgatggtggatataatggatttggaggtgatggtggcaac
tatggtggtggtcctggttatagtagtagaggaggttatggtggtggtggaccaggatat
ggaaaccaaggtggtggatatggtggtggaggaggatatgatggttacaatgaaggagga
aattttggtggtggtaactatggtggtggtgggaactataatgactttggaaattacagt
ggacaacagcaatcaaattatggacccatgaaggggggcagttttggtggaagaagctct
ggcagtccctatggtggtggttatggatctggtggtggaagtggtggatatggtagcaga
aggttttaa
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