Marmota marmota marmota (Alpine marmot): 107149540
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Entry
107149540 CDS
T09644
Symbol
Sox2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04390
Hippo signaling pathway
mmma04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
107149540 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
107149540 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107149540 (Sox2)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107149540 (Sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107149540
NCBI-ProteinID:
XP_015349810
Ensembl:
ENSMMMG00000003111
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMA
QENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLM
KKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQLGY
PQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSM
GSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQS
GPVPGTAINGTLPLSHM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggcggcggcggc
ggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagcccggaccgc
gttaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgcaagatggcc
caggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcggagtggaaa
cttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgactgcgagcgctg
cacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacgctcatg
aagaaggataagtacacgctgcctggcgggctcttggcccccggcggcaacagcatggcg
agcggggttggggtgggcgccggcctgggcgcgggcgtgaatcagcgcatggacagttac
gcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctgggctat
cctcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagcccatgcaccgctac
gacgtgagcgctctgcagtacaactccatgaccagctcgcagacctacatgaacggctcg
cccacctacagtatgtcctactcgcagcagggcacccctggcatggcgcttggctccatg
ggctcggtggtcaagtccgaggccagttctagcccccctgtggttacctcttcctcccac
tccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctccccggc
gccgaggtgccggagcccgccgcccccagcagacttcacatgtcccagcactaccagagc
ggcccggtgcccggcacagccattaacggcacactgcccctctcgcacatgtga
DBGET
integrated database retrieval system
