Marmota marmota marmota (Alpine marmot): 107149746
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Entry
107149746 CDS
T09644
Symbol
Pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107149746 (Pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
107149746 (Pdlim1)
Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107149746 (Pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF8106
Motif
Other DBs
NCBI-GeneID:
107149746
NCBI-ProteinID:
XP_015350045
Ensembl:
ENSMMMG00000019890
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MIRANSLLQGVAEPQLWALKVWVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNKI
KGCTDNMTLTVARSEHKVWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAHNRSAVPFTAS
PASSTAPRIIKNQYNNPAGLYSSENISSFNNAVESKTAASGEETNGRPLDHPQPSGGLAI
SKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSVKAPVTKVAAS
IGNAQKLPMCDKCGTGIVGVFVKLRDHHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKH
ARERVIPPEGYDVVTVFPK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattagagccaacagtcttcttcaaggggtagcggagccacagctgtgggcactgaaa
gtctgggtcactcctggaagcaaggctgctctagctaatttatgtatcggagacgtgatt
acagccatcgatggggaaaataccagcaatatgacgcacctggaagctcagaacaaaatc
aagggctgcacagacaatatgacgctcacggtagccagatcggaacataaagtctggtct
cctctagtgactgaggaagggaaacgccatccctacaagatgaatctagcttctgaaccc
caagaggtcctgcacataggaagtgcccacaaccgaagtgcagtcccctttactgcctca
cctgcttccagcactgcccccaggatcattaaaaaccagtacaacaacccagctggcctc
tactcttctgaaaacatctccagcttcaacaatgctgtggagtccaagactgcagccagc
ggggaggagacgaatggcagacccttagaccatcctcagccttcaggcggccttgccatc
agcaaagaatctgaagtttacaagatgcttcaggagaaacaggagttaaatgagcccccg
aaacagtccacgtcattcctggttttgcaggaaatcctagaatcagaggaaaaaggggat
cccaacaaaccctcaggattcagaagtgttaaagctccagtcaccaaagtggctgcctcg
attggaaatgctcagaagttgcctatgtgtgacaaatgtggcaccggcattgtgggagtg
tttgtgaagctgcgggaccaccaccgccaccctgagtgctacgtgtgcaccgactgtggc
acgaacctgaagcagaagggccatttcttcgtagaggatcaaatctattgtgaaaagcac
gcccgggagcgcgtcataccccccgagggatacgacgtggtcaccgtgttccccaagtga
DBGET
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