Marmota marmota marmota (Alpine marmot): 107149810
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Entry
107149810 CDS
T09644
Symbol
Twnk
Name
(RefSeq) twinkle mtDNA helicase isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
107149810 (Twnk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107149810 (Twnk)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107149810 (Twnk)
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
107149810 (Twnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_29
AAA_16
AAA_23
T2SSE
TsaE
nSTAND3
ABC_tran
cobW
SMP_C2CD2L
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
107149810
NCBI-ProteinID:
XP_015350157
Ensembl:
ENSMMMG00000023092
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MWVLLRGAYPLRILLPLRGVWMGRRGLPRSLVPGSSRRRYRKEALPALEIPVLPLTTTEI
RQYLRAHGIPFQDGYSCLRAPSPFVGSSEPKDQTSAATSFSLFIDKTTGRFLCMTSLAEG
SWEDFQASVEGRGDGAREGALLTEAPEAKDIEEIRRIWDRAIPLWELPDPEEAQLARMIF
GLTKVTDETLRRFSVRYLRPARSLVFPWFSPRDLGLRGLKLLGAEGQGDGVHYVETTIPR
PGAYHNLFGLPLISRRDVEVVLTSRELDSLALNQSTGLPTLALPRGTICLPPALLPYLEQ
FRRIVFWLGDDLRSWEAAKLFARKLNPKRCSLVRPGDQQPRPLEAMNQGLNLSRILRTAL
PAWHKSIVSFQQLREEVLGEISNVEQAAGVPWSRFPDLNRLLKGHRKGELTVFTGPTGSG
KTTFISEYALDLCTQGVNTLWGSFEISNVRLARVMLTQFAMGRPEEQLDKYEEWADRFED
LPLYFMTFHGQQSIRSVIDTMQHAVYVYDVCHVVIDNLQFMMGHEQLSTDRIAAQDYIVG
AFRKFATDNSCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPGK
RYLQVSKNRFDGDVGVFPLEFNKNSLTFSIPPKSKARLKKIKDDNGLVAKKPSSGKKGAV
PQNSET
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcctccggggtgcatacccactccggatcttgctgcccctgcgtggggtg
tggatgggtcggaggggcctgccccgaagcttggtcccaggctcttctcgtcgcaggtac
aggaaggaggctcttccagccttggagataccagtgttgcctctaactacaactgaaatt
cggcagtatttacgggcacatggaatcccctttcaggatggctacagctgccttcgagca
cctagcccttttgtggggtcctcagagcccaaggatcagactagtgctgccacttccttc
agtctcttcattgacaagaccacaggccgctttctctgcatgactagcctagcagagggg
agctgggaagacttccaagcaagtgtggagggacgaggggatggggccagagagggggcc
ctgcttactgaggctccagaagctaaggacattgaggagatccggaggatctgggaccga
gcaataccgctctgggagctgcctgacccagaggaagcccagttggctcgtatgatattt
ggccttaccaaagtgacagatgaaacactcaggcgtttcagtgttcgatacctacgacct
gctcgcagtctggtctttccctggttttcccctcgggatttaggattacgaggtctgaag
ctattaggggctgaaggccagggagatggagtacactacgtggagaccactattccccgg
cctggtgcctaccacaacctgtttggattaccactgatcagccgtcgagatgttgaggtg
gttctgaccagtcgtgagctggacagcctggccttgaaccagtctacagggctgcccacc
cttgccctaccccgaggaaccatctgcttaccccctgccttactcccttacctcgaacag
ttccgaaggattgtgttctggctaggggatgatcttcggtcctgggaagctgccaagttg
tttgcccgaaaactgaaccccaagcgatgctctttggtgcgtcctggagaccaacagccc
cgtccccttgaggccatgaaccaaggcttaaatctttctcgtattcttcgtactgccctg
cctgcctggcacaaatctattgtgtccttccagcagcttcgggaagaggtgctaggagaa
atatcaaatgtggagcaagcagctggtgtcccctggagccgctttccagacctcaatcgt
ctcttgaaggggcaccggaaaggcgagctgacagtcttcacagggccaacaggcagtgga
aagacaacattcatcagtgagtatgccctggatttgtgtacccagggggtgaacacacta
tggggtagctttgagatcagcaacgtgagactagcccgggtcatgctgacgcagtttgcc
atggggcgtccagaagaacaattggataaatatgaagagtgggccgaccgctttgaggac
ctgcctctctatttcatgactttccatggacagcagagcatcaggtctgtaatagacaca
atgcaacatgcagtctatgtctatgatgtttgtcatgtggtcatcgacaacttgcagttc
atgatgggtcacgagcagctgtctacagacaggattgcagctcaagactacatcgttggg
gcctttcggaagtttgcaacagacaacagctgccatgtgacactggtcattcacccccgg
aaggaggatgatgacaaggaattgcagacagcatccatttttggctcagccaaagcaagc
caagaagcagacaacgttctgatcctgcaggacaggaaactggtaactgggccaggaaaa
cgatatctgcaggtttccaagaaccgctttgatggagatgtgggtgtcttcccacttgag
ttcaacaagaactctctcaccttctccatccctccaaagagcaaagcccggctcaagaag
atcaaggatgacaatggactagtggccaaaaagccctcttctggcaaaaaaggggctgtg
ccccaaaactctgagacttaa
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