Marmota marmota marmota (Alpine marmot): 107149854 Help Entry 107149854         CDS       T09644                                  Symbol Pdcd11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism mmma  Marmota marmota marmota (Alpine marmot) Brite KEGG Orthology (KO) [BR:mmma00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:mmma03009]     107149854 (Pdcd11) Ribosome biogenesis [BR:mmma03009]  Eukaryotic type   90S particles    Other 90S particles     107149854 (Pdcd11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 Spt6_S1 HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_C OB_RRP5_4th Suf OB_RRP5 TPR_14 TPR_19 ARM_TT21 UTP6_C TPR_CcmH_CycH DUF2110 DUF7017 TPR_15 ARM_TT21_5th Motif Other DBs NCBI-GeneID:  107149854 NCBI-ProteinID:  XP_015350226 Ensembl:  ENSMMMG00000000038 LinkDB All DBs Position Unknown AA seq 1877 aa AA seqDB search MATVEESFPRGGTRKTHKLEKSFQESVEQDNLFDISTEEEPTKRKKSQKGPAKTKKLKIE KKENSKSIKEKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEISDDYT KMLNEQVAQEDPLKDLLRLPELFSPGMLVRCVVSSLRITERGKKSVKLSLNPKNVNRVLS AEALKPGMLLTGTVSSLEDHGYLVDIGVGGSRAFLPLQKAQDYIQQKNKGAKLKVGQYLN CVIEEVKSNGGVVSLSIGHSEVSTAIATEEQNWTLNNLLPGLVVKAQVQKVTQFGLRLNF LTFFTGLVDFMHLEPKKVGTYFSNQAVRACILCIHPRTRVVRLSLRPVFLQPGRPFTRLS CQHLGAVLDDVPVQGFFNKAGATFRLKDGALAYARLSHLSDSKKVFSPEAFKPGNTHKCR IIDYSQMDELALLSLRTSIIEAQYLGYHDIKTGSVVKGKVLTIKPFGILVKVGEQMRGLV PAMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLVMTLKKTLVTSKLPAITCYGDAK PGLQTHGVIIRVKDYGCIVKFYNDVQGLVPKHELSAQYIPDPERVFYIGQVVKVTVLNCE PSKERMLLSFKLLSDPEPENKKESVGHGQKTGRVVNVGQVVDVKVLEKTKDGLQVAVLPH NIPAFLPTPHLSDHVANGPLLYRWLQAGDTLHRVLCLSQSEKHVLLCRKPSLVSSVEGGQ DPNSFSEIHTGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTNPSDHFVEGQT VVAKVTNVDEEKQRMLLSLRLSDCTLGEPASTSLLLLSQCLEELQGVRSLMSNQDSVLIQ TLAEMTPGMVLDLVVQEVLEDGSVVFSGGPVPDLVLRASRYHRAGQEVESGQKKKVVILN VDMLKLEVHVSLCQELVNRKSKKLKKGSKHQAIVQHLEESFAVASLVETGHLVAFSLTSH LNDTFRFDSEKLQVGQGVCLTLKTTEPGVTGLLLAVEGPAAKRTMGETRKDSETVDEDEE GDPALTVGTKKKHTFVIGDILTGTVKSVKPTHVVVTLEDGIVGCIHASHILDDVPVGTSP TTKLKVGKTITARVIGGRDVKTFKFLPISHPRFVRTILELSVRPSELEEDGHTALNTYSA SPMEKIKQYHAGQIVTCFLKRYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKF QIGQALRATVVGPDSSKAFLCLSLIGPHKLEKGDVAMGRVVKVTPNKGLTVSFPFGRMGR VSIFHVSDSYSETPLKDFIPQKVVRCYVLSTGDHVLTLSLRLSRTNPETKSKVEDPEIDS IQDVKEGQLLRGYVRSIQPNGVLLGLGPSVVGLAQYSHVSQRNLPNKDLYHEYLPEGKLL TAKVLSLNHQKNLVELSFLPRDTGKPDVFSAPLELPLLKQKERRIETEKQDQKGEKKEKN NQKRKETKNQKGQEEVKVPSKEKKEPQRPQVKRQDKRERQESGNEQERANKRQKTGLAEE DDSGVEVYYREGEEEIEETKVQLKGRLTKPADVPRLQLSSGFIWDVGLDSLTPALPPQGE SSDSEEDEKPHQATQKKKSKKERELEKQKAEKELSRIEQALMDPGRQPESADDFDRLVLS SPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQ ESLTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAF LLRRSQAGASHRVLQRALECLPTKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKR TDVWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAV KAKALEYVEAKNSVLDD NT seq 5634 nt NT seq  +upstreamnt  +downstreamnt atggcaactgtagaagaaagcttcccccgagggggtacaagaaagacccacaaattagag aaatctttccaggagtcagttgaacaagacaacttatttgatatttccactgaagaagaa cccaccaaaaggaaaaagagccagaaaggaccagcaaaaacaaaaaagttgaaaattgaa aaaaaagaaaacagcaagtctatcaaagagaaatttgaaattcttagtgttgagtccctt tgtgagggaatgcggattttaggttgtgtgaaagaggtaaatgagctggaactggtgata agtctccccaatggcctccagggatttgtgcaagtaactgaaatctctgatgactatacc aaaatgctgaatgaacaggtggcacaagaagaccctctgaaggacctgctacgcttgcct gaacttttctcacctggaatgctggtgagatgtgtggtaagcagtctgagaatcacagag aggggcaaaaaaagtgtcaagctatctctgaaccccaaaaatgtcaacagagtgctgagt gctgaggccctgaagcctggcatgctgctgacgggcactgtatctagcctggaagaccat ggctacctagtggacattggtgttggtggaagcagagcttttctgccattgcaaaaagct caagactacatccaacaaaagaacaaaggtgctaaactgaaggtgggtcagtacttgaac tgtgtaattgaagaggtgaaaagcaatggaggagttgttagtctgtctatagggcattca gaagtttctactgccattgctactgaggaacaaaattggacccttaataacttgctacca ggactggtggtcaaagcccaggtacagaaggtgactcagtttggtcttaggctaaacttc ctcacattcttcacgggccttgttgactttatgcacctggaacccaagaaagttgggacg tatttctcaaaccaagcagtaagggcctgcatcctttgtattcatcctaggaccagagtt gtgcgcctgagcctgcgccctgtcttcctgcaacctggacgcccattcacccggctctct tgccagcacctaggagctgtgctggatgatgttcctgtccaggggtttttcaacaaggct ggggccaccttcaggctaaaggatggggctctggcctatgcccggctcagccatctctct gattctaagaaagtcttcagtcctgaggccttcaagccagggaacactcacaaatgtaga attattgactacagccaaatggatgaactggcattgctttctctacggacatctattatc gaagctcaatatcttggatatcatgacatcaaaactgggtcagtggtgaagggaaaagta ttgaccataaagccatttgggatcttggtgaaggtgggtgagcaaatgaggggcctagta cctgccatgcacctggctgacattctgatgaagaatccagagaagaagtaccacattggg gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctggtaatgacc ctgaagaaaactctggtcacgtccaaactgcctgccattacctgctatggtgatgccaag cctggactacagacacatggcgtcatcatcagggtcaaggactatggctgcattgtgaag ttctacaatgatgtacagggactggttcccaagcatgagcttagtgcccagtatatccct gacccagagagggtcttttacattggccaggtggtaaaggttacagtgctgaactgtgag ccatccaaggagaggatgcttttgtccttcaaactgctgagtgatccagagcccgagaac aagaaagagagtgtgggacatggtcagaagacaggaagagtcgttaatgttgggcaggtg gtggatgtgaaggttttagagaagaccaaagatgggcttcaggtggctgtcctgccccac aacatccctgctttccttcctacacctcatttgtcagaccatgttgccaacggtccgcta ttgtatcgctggctccaggcgggcgacacccttcaccgagtcctgtgtctgagccagagc gagaaacatgttctcctttgcaggaagccatccttggtttcctcagtagaaggtggtcag gatcccaacagcttctcagaaatccatacaggaatgctgcttattggttttgtgaagagc atcaaggactatggtgtgtttgtccagttcccctccggtcttagtggactggcacccaaa gctatcatgagtgataagtttgtaaccaacccaagtgaccactttgttgaggggcagaca gtggttgcaaaagtgaccaacgtggatgaggagaagcagcggatgctgctgtcgctacgg ctgtcagactgcactctgggggaaccagccagcaccagcctcctcctcctgagccagtgc ctggaggagctgcagggtgtgcgcagcctcatgagcaaccaagactctgtgttgatccag acgctggctgagatgaccccaggaatggtccttgacttagtggtgcaggaagtgttggaa gatggctctgttgtgttcagcgggggtccagtgcctgacctggtcttgagagccagcagg tatcatcgggcaggtcaggaagtagaatctggccagaaaaaaaaggttgtaatcctcaat gttgatatgttgaagttggaggtgcatgtttccctttgtcaggagttggtgaataggaaa tctaaaaagctgaagaaaggcagcaaacaccaggccatcgtgcaacacctggaggagtcc tttgctgtggcctccttagtggagactggccacctggtagctttctccctgacctctcac ctcaatgacaccttccgctttgactcagagaaattgcaggtgggacagggtgtctgccta accctcaagaccacagaaccaggagtgacgggtcttcttctggctgttgaggggccagcg gccaaaaggaccatgggagagacccggaaggattctgagacagttgatgaggatgaggag ggggatccagctctgactgtagggactaaaaagaagcacacctttgttattggggacatt ctcactgggactgtcaagtctgttaagcccactcatgtggttgtgactctggaagatggc attgttggctgtatccatgcgtcccatatcttggatgatgttccagtgggcacctctcct actaccaagctgaaagttgggaagacaatcacagcccgagtgattggtggacgagatgtg aagacttttaagtttctcccaatcagtcatcccagatttgttcgaactatcctggagctg agtgttcggccaagtgagctggaggaggatggccacactgctcttaacacttattctgcc agtcccatggagaagattaagcagtaccatgctggtcagatcgtgacttgcttcttaaag aggtataatgtggttaagaaatggcttgaggtggagattgcaccagatatccgggggaga attcccttgttgctcacttctcttagcttcaaggttctgaaacatccagataagaagttc cagattggacaggccttgagggccaccgtggttggcccagactcctccaaggccttcttg tgtctctcactcataggtcctcacaagcttgagaaaggagatgtggccatgggccgagtg gtaaaggtgacacctaataaggggctgactgtctctttcccctttgggaggatgggaagg gtcagcatatttcatgttagtgactcctactctgagacgccactgaaggacttcattccc cagaaagttgtcagatgttatgtcctctccactggagaccatgtattaactttatcactg cgattgtccaggacaaacccagagaccaaaagcaaagtagaagatccagaaattgattcc atccaggatgttaaggaagggcagctcctgaggggctacgtgaggtccatccagccaaat ggtgtgctcttaggtcttggcccctcagttgttggtttggcccagtactcacatgtctcc cagcgcaacctgcccaacaaggacctttatcacgaatacctcccagaaggaaaactgctc accgccaaggtcctaagcctgaaccaccagaagaacctggtagagctctcattcctcccc agagacactgggaagcctgacgtattttccgctcccctggagctgccacttctgaagcaa aaggaaaggagaatagagactgaaaagcaagaccaaaaaggagaaaagaaggagaaaaat aatcagaaaaggaaagaaacaaagaaccagaaggggcaggaggaggtgaaggtgcccagt aaggagaagaaagagccccagaggccacaagtgaagaggcaggataagcgggagcgccag gaatctgggaatgagcaggaaagagcaaacaagaggcagaagactggtctggcagaggag gatgacagtggcgtggaagtgtattatcgggaaggagaagaggaaatagaagagacaaag gtgcagctcaaggggaggctgaccaagcccgcagacgtgccccggctacagctttcttcg ggctttatttgggatgttggactcgactctctgaccccagccttgccacctcaaggggag agctcagatagcgaggaagacgagaagccacatcaagccacgcagaaaaagaaaagcaag aaggaaagggaattggaaaagcagaaggcagagaaagagctgtcccgcattgagcaggct ctcatggatcctgggcgacagccagaatcagcagatgattttgatcgactagtactaagc tcccccaacagctccatcctgtggctgcagtacatggctttccaccttcaggccacagag attgagaaggctcgggccgtggcagagagagccctgaagaccatctccttcagagaggag caggagaagctgaacgtgtgggtggcactgctgaacctggaaaacatgtatggctctcag gagtctttgaccaaggtctttgaacgggctgtgcagtacaatgagcctctcaaggtcttc ctccacctggctgacatctacaccaagtctgagaagttccaggaagctggtgagctgtac aaccggatgttgaagcgtttccgtcaggagaaagctgtctggatcaagtatggtgccttt cttttgcggaggagccaggctggggccagtcaccgtgttctgcagcgggcccttgagtgc ttgcctaccaaggagcatgtggatgtgattgccaagtttgcccagctggaattccagctg ggggatgcagagcgagcaaaagccatttttgaaaacacactgagcacctacccaaagcgc acagatgtctggtcagtctacattgacatgaccatcaagcatggcagccagaaggaagtc cgagacatatttgagcgtgtcattcatctgagcctggcccccaagagaatgaagttcttc ttcaagcgctatctggactatgaaaagcaacatggcactgagaaggatgtgcaggcagtc aaggcgaaggccctggaatacgtggaggccaagaactcagtgctggacgattag

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