Marmota marmota marmota (Alpine marmot): 107149864 Help Entry 107149864         CDS       T09644                                  Symbol Col17a1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism mmma  Marmota marmota marmota (Alpine marmot) Pathway mmma04382   Cornified envelope formation mmma04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:mmma00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     107149864 (Col17a1)   09158 Development and regeneration    04382 Cornified envelope formation     107149864 (Col17a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen DUF2868 Motif Other DBs NCBI-GeneID:  107149864 NCBI-ProteinID:  XP_015350242 Ensembl:  ENSMMMG00000000492 LinkDB All DBs Position Unknown AA seq 1500 aa AA seqDB search MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYTKTGSLGGGSRLEKQSLTHG SSGYINSSGSLRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSP EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS SSTLPIPKKGTVETKMVTASSQSVSGTYDTTILDANLPSHMWSSTLPAGSSMGTYHNNMT TQSSSLLNTNAYSAGSVFGVPNNMTSCSSTLHPGLSTCSSVFGMQNNLGPSSSALSHSTA TATTSTAYGVKKNVPQSPAVVSTGVSTTSTASTTNVQSDDLLHKDCKFLILEKDNVPAKK EMELLIMTKDSGKVFTASPASIAATSFSEDTLKKEKQAAYAADTCLKAETNGDLKTISTK GKGTSADLHGYDRGGGVGGGGGGGGGGLWGGAPAWCPCGSCCSWWKWLLGLLLTWLLLLG LLFGLIALAEEVRKLKARVDELERTRTGVLYYEDKMDRSNKDRLQGAAPDLGTGIDKAGL DIPSQEALWLFVRNKLMIEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPG PEGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGATGEAGPQGPPGV PGSVGPKGSSGSPGPHGPPGSIGPQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGL TGEPGVRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGMMGMPGTRGLPGPAGDPGKPGL TGPQGPQGLPGTPGPPGTKGEPGTPGKIVTSGGSSTITVPGPPGPPGAMGPPGPPGTPGP AGPAGLPGQQGPRGEPGLAGESFISSSSSISEVLSAQGLDLRGPPGPPGPRGPPGPAIPG PPGPRGPPGEGLPGPPGPPGSFLADSENFFSGPPGPPGPPGPKGDPGPPGPRRHQGSSSL AFDLQGPPGPPGPQGPKGDPGVPGAPGIPGVPSQGGSSSTMYVPGPPGPPGPPGPPGSLS SSGQEIQQYISEYMQSDSIRSYLSGVQGPPGPRGPPGPVTTITGETFDYAELASHVVKYL QTSGYSITSSSSSISSEDILAVLQRDEVRQYLRQYLMGPRGPPGPPGASGDGSLLSLDYA ELSNRIISYMSSSGIGIGLPGPPGPPGLPGTSYEELLSLLRGSEYRGIIGPPGPPGPPGI PGNAWSSISMEDLSSYLHSAGLSFTTGPPGPPGPPGPRGPPGVSGALVNYAAENSDNFRS ELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSRDNSYSWGHSSSSSRGTSYSSSGVG GTNGGSLGEGGAFGTGDGGPYGTDISRGGGYGAASEGGVYGGNGESFRAGFAGDLDYNEL AVRVSESLQRQGLLQGMAYTVQGPPGQPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAI PGPPGQKGEMGIPGPKGDRGPPGSRGLPGPPGPQGHKGEKGDKGDQVYVGRRKRSIAIKP NT seq 4503 nt NT seq  +upstreamnt  +downstreamnt atggatgtgacgaagaaaaacaaacgagatggcactgaagtcactgaaagaattatcact gaaacagtaactacaagacttacctccttaccaccaaaagggggaaccagcaatggctac accaaaacaggctctctgggtggagggagccggctggagaagcaaagcctgacccatggc agcagtggctacataaactcaagtggaagcctcaggggcaatgcctctacctccagttac aggagggcacattcgcctgcctccactctgcccaactcaccaggctccaccttcgagagg aaaactcacatcacccgccatgggacatacgaagggagctccagcggaaactcttctccg gagtacccccggaaggaatttgcatcatcttcaactcgaggacggagccaaacacgagag agtgagattcgagttcgactgcagagtgcgtccccatctaccagatggacagaattggat gatgtgaagcgtttgctcaaggggagccgatcagcaagtgtcagtcccacccgcaactcc tccagcactctccccatccccaagaaaggcaccgtggaaaccaaaatggtgacagcaagc tcccagtcagtgtcagggacctacgacacaacgatcctggatgccaaccttccttcccat atgtggtcctctactttgcctgcggggtcctccatggggacctaccacaacaacatgaca acccagagctcatctctcctcaacaccaatgcctactcagcaggatcagtctttggagtt ccaaataacatgacatcctgctcttccaccctgcacccaggactcagcacctgctcctca gtgtttggcatgcagaacaatctgggccccagttcgtctgctctgtcccacagcacggcc actgccaccacttccacagcatatggtgtgaagaaaaacgtgccccagagccctgccgtc gtgagcaccggtgtatccaccacctctacagcctctaccaccaatgtccagagtgatgac ctcttgcacaaggactgcaagttcctgatcctggagaaagacaatgtgcctgccaagaag gagatggagctgctgatcatgaccaaagacagcgggaaggtcttcacggcctcccctgcc agcatcgctgcaacttctttttcagaagacaccctgaaaaaagaaaagcaggctgcctac gctgctgacacttgcctgaaagcagaaactaatggagacttgaagaccatatccacaaag ggcaagggcacctccgcagatctccatggctatgaccgaggcggcggtgttggtggaggt ggaggcggtggtggcgggggactgtgggggggtgcacctgcctggtgcccctgcggttcc tgctgcagctggtggaaatggctgctgggcctgctgctcacctggctgctgctcctggga ctactctttggcctcattgctctggcggaggaggtgaggaagctgaaagcccgtgtggat gagctggagaggaccaggaccggcgtgctctattatgaggacaagatggacaggagcaac aaggaccgcctgcagggagctgcgcccgacctgggtactggcatagacaaagcaggactg gacatccccagccaggaggcactctggctgttcgtgaggaacaagctgatgattgagcag gaaaatggaaacctccgaggaagccctggccctaaaggcgacatgggaagtcaaggccct aaaggagatcgaggtctccctgggactccaggtatccctgggctcttgggccacccaggt ccagaaggaccaaagggacaaaaaggcagcgtgggagatcctggcatggaaggacccatg ggccagagagggcgagagggccccatgggacctcgtggtgaaccagggcctcctgggttt ggagagaaaggggacagaggagctactggtgaagctggtcctcagggccctcctggtgtc ccgggttctgtgggtccaaaaggttccagtggctctcctggaccccatggccccccaggt tctataggtccccaagggctccgaggtgaagtgggactccctggtgtcaaaggcgacaaa ggacctatgggaccaccaggacccaaaggtgaccagggtgagaaaggacctcgaggcctc acaggcgagcctggagtgagaggtttgcctggagcggtgggcgagcccggagctaaagga gcaatgggtcctgctggccctgatggacaacaaggcccaagaggtgagcaaggcatgatg gggatgcctggaacccgtggcctaccaggacctgctggagatccaggaaagccaggtctc acaggaccccagggacctcagggacttcctgggacccctggccctccggggactaaaggt gaacctggcactccaggcaagatagtgacttcaggtggatcatcaacaatcactgtccca ggccccccagggcctcctggagcgatgggacccccagggcccccaggtaccccaggtcct gctggccccgctggtctcccaggacagcaaggtccacgaggggagccaggacttgcgggt gaatccttcatcagttctagcagctccatctccgaagtcctctctgctcaaggtcttgat ttacgaggtcccccaggcccacctgggccacgtgggccaccagggcctgccatccccggc cctccaggaccccgaggacctccaggagaaggcttgccaggcccaccaggcccaccagga tctttcctggctgactcagaaaacttcttctctggccctccaggcccacctggcccccca ggccccaagggagacccaggtcccccaggcccccgaagacatcaaggttccagttccctg gcatttgacctacagggaccaccaggcccacctggcccacagggacccaaaggtgatccc ggtgtcccaggggctcctggcatccccggagttccctctcaagggggatcatcaagcacc atgtatgtgccaggcccacctggaccaccagggccccctgggcctccaggctccctcagc agctccggccaggagattcagcagtacatctctgaatacatgcagagtgacagcattagg tcttatctatctggagtacagggtcccccaggcccacgaggtcctccggggcctgtcacc accattacaggagagacttttgactacgcagagctggcaagccacgttgtgaagtacttg cagacttcagggtacagtatcacctcttcctcgtcctccatctcctccgaagacatcctg gctgtgctgcagcgtgatgaagtgcgtcaatacctgcgtcagtacctgatgggccctcgg ggtcccccagggccaccaggagctagtggagatgggtccctcctgtctttggactatgca gagctgagcaatcgcatcatcagctacatgtcgagttctgggatcggcattgggcttccg ggccccccaggtccccctggcctcccaggaacttcctatgaggagctcctctccttgctc cgagggtctgaatatagaggcatcattggacccccaggtcctccagggccaccagggatc ccaggcaatgcatggtccagcatcagcatggaggacctctcttcttacttgcacagtgca ggcttgtcattcaccacaggccctccaggccctcctgggcccccaggtcctcgagggccc ccaggtgtctcaggagctctggtaaactatgcagctgaaaacagtgacaacttccggagt gagctgattagctacctcacaagtcctgatgtgcgcagcttcatcgttgggcccccaggc cctcctgggccacagggaccaccaggagacagccgtttggtgtcacgggataactcctac agttggggtcacagctcttcctccagtcggggcacgtcctacagttcttcaggtgttgga ggaaccaatggaggctccctgggtgaaggtggagcctttggcacaggagatgggggtccc tatggcactgacatcagcagaggtgggggctatggggcagcatcagaaggcggcgtgtat ggtggcaatggcgaatcgttccgagctggcttcgctggagacctggattacaatgagctg gctgtgagggtgtcagagagcttgcaacgtcagggcctgctacagggaatggcctacact gtccagggcccaccagggcagcctgggccccagggtccccctggcatcagcaaggtcttc tctgcctacagcaacgtaactgaagacctcatggacttcttccgaacttatggagccatt ccaggaccccctgggcagaagggagaaatgggcatcccaggacccaaaggtgacagaggc cctcctggatcacgaggccttcctgggccacctggccctcaagggcacaagggagaaaaa ggagacaaaggtgaccaagtctacgttgggcggaggaagagaagtattgccatcaaacca tga

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