Marmota marmota marmota (Alpine marmot): 107149889
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Entry
107149889 CDS
T09644
Symbol
Shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
107149889 (Shoc2)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_13
NKWYS
Motif
Other DBs
NCBI-GeneID:
107149889
NCBI-ProteinID:
XP_015350273
Ensembl:
ENSMMMG00000002171
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPESLLSSLVKLNSLTLARNCFQLY
PVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVE
LNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE
IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLND
NPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtttaggaaaagaaaaagactctaaagagaaagatcccaaagtaccatca
gccaaggaaagagaaaaggaggcaaaggcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaaaaaggactccagtgctgcc
caaccaggggtggctttttcagttgacaatacgatcaaacggccaaatcctgcacctggg
actaggaaaaaatccagtaacgcagaagtgattaaagagctcaacaaatgccgggaagag
aattcaatgcgtttggacttatccaagagatctatacacatattgccatcatcaatcaaa
gagttgactcaattaacagaactttatttatacagtaacaaattgcagtccctcccagca
gaggtgggctgtttagtaaatctcatgacactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtgtataggctagattctctcaccactctctaccttcgc
tttaatcgtattactactgtggaaaaggacatcaaaaacctgtcaaaactcagcatgctt
agcattcgcgagaacaaaatcaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacatcttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactgctagacctcccagagagtctt
ttatccagtcttgtgaaactgaatagcttgaccttagctagaaattgcttccaattgtat
ccagtgggtggtccatctcagttttctaccatctattccctcaacatggaacacaatcga
atcaataaaatcccatttggaattttctctagagcaaaagtattaagtaagctgaatatg
aaggacaatcagttaacatcacttcctttggactttggaacttggaccagcatggtagaa
ttgaatttagccactaatcagctcacaaagatccccgaggatgtatctggacttgtttct
cttgaggttctaatattatcaaacaatcttctgaagaagcttccccatggtcttggaaac
cttaggaagttaagagagttggatctagaggagaacaaattagaatccttgccaaatgaa
attgcttatcttaaagatttacagaaattagtcttgacaaacaaccaattgaccactctt
cccagaggcattggtcaccttaccaatcttacacatctaggccttggagagaacctactt
actcatcttcctgaggaaattggtacactggaaaacctagaagaactgtatttgaatgac
aaccctaacctacatagccttccctttgagctggctctctgcagcaagctttcaatcatg
agtattgagaactgtccactcagtcaccttccacctcagattgttgctgggggaccttct
ttcatcattcagttcttaaaaatgcagggtccatatcgtgccatggtctga
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