Marmota marmota marmota (Alpine marmot): 107150079
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Entry
107150079 CDS
T09644
Symbol
Slc6a11
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04082
Neuroactive ligand signaling
mmma04721
Synaptic vesicle cycle
mmma04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107150079 (Slc6a11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
107150079 (Slc6a11)
04721 Synaptic vesicle cycle
107150079 (Slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107150079 (Slc6a11)
Transporters [BR:
mmma02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107150079 (Slc6a11)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107150079
NCBI-ProteinID:
XP_015350508
Ensembl:
ENSMMMG00000009836
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All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MTAEKALPLGNGKAAEEARETEALGGSGGSGACGRRGAAPARDPRDKRDKAVHERGQWNN
KVEFVLSVAGEIIGLGNGGGWRFGHLCWWFGKGGAFLIPYVVFFICCGIPVFFLETALGQ
FTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCG
HEWNTENCVEFQKLNVSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCL
LAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSR
LSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAI
FSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQF
VCVESLVTAVVDMYPKVFRRGYRRELLILALSVISYFLGLVMLTEGGMYIFQLFDSYAAS
GMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKIVTPGICAGIFIFFL
VKYKPLKYNNVYTYPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKFRKLTVPSS
DLKMRGKLGAGPRTVMVNDCDAKLKGDGTIAAITEKETHF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggcgctgcccctgggcaatgggaaggctgccgaggaggcgcgggag
actgaagcgctcggtggtagcggcggcagcggtgcgtgcggcaggcggggcgcggcgccc
gcgcgcgacccgcgcgacaagcgcgacaaggctgtccacgagcgtggccagtggaacaac
aaggtggagttcgtgctgagcgtggccggggagattatcgggctgggcaacggggggggg
tggagatttggccacctatgttggtggtttggcaaagggggggcattcctgattccctat
gtggtattttttatttgctgtggaattcctgtctttttcctggaaacggctctggggcaa
ttcacaagtgaaggaggcattacgtgttggaggaaagtctgccctttatttgaaggaatt
ggctatgcaacgcaggtgattgaggcccatctaaatgtgtattacatcatcatcctggca
tgggccattttctacctgagcaactgctttaccacggagctcccctgggctacctgtggg
catgagtggaacacagagaattgcgtggagttccagaaactgaatgtgagcaactacagc
catgtgtccctgcagaatgccacctcccccgtcatggagttttgggagcgccgggtcctg
gccatctctgatgggatcgagcacattgggaacctccgctgggagctggccttgtgtctc
ctggcagcctggaccatctgctacttctgtatctggaaggggaccaagtcgacaggaaag
gttgtgtacgtcactgcgacattcccctacatcatgcttctgatcctgctgatccgaggg
gtgacgttgccaggggcctctgaaggcatcaagttctacctgtaccctgatctctcccgg
ctctcagacccacaggtgtgggtcgatgccgggacgcagatcttcttctcctacgccatc
tgcctgggctgcctgactgctctgggaagctataacaattacaacaacaactgctacagg
gactgcatcatgctctgttgcctgaacagcggcaccagcttcgtggccgggtttgccatc
ttctcagtcctgggcttcatggcatacgagcagggggtacccattgccgaggtggcagag
tcaggtcccggcctggccttcatcgcctatccaaaggctgtcaccatgatgcctctctcc
ccgctgtgggccaccctgttcttcatgatgctcatctttctgggcctggacagccagttt
gtgtgcgtggaaagcctggtgaccgccgtggtggacatgtaccccaaggtcttccggagg
ggctatcgtcgggagctgctcatcctggccctgtcggtcatctcctattttctgggcctc
gtgatgctaacggagggaggcatgtacatcttccagctgtttgactcctatgcagccagc
gggatgtgccttctcttcgtggccatctttgagtgtgtctgcattggctgggtgtatgga
agcaaccggttctatgataacattgaagacatgattggctaccggccactgtcgctcatc
aaatggtgctggaagatcgtgacccctgggatctgcgcgggcatcttcatcttcttcctg
gtcaagtacaagcccctgaagtacaacaacgtctacacctaccctgcctggggctacggc
atcggctggctcatggccttgtcctccatgctctgcatcccgctctggatcttcatcaag
ctgtggaagacagagggcacgctgcccgagaaattccggaagttgacagtccccagctcc
gatctgaaaatgcggggcaagcttggggcaggcccacggacggtgatggttaatgactgt
gacgccaagctcaagggtgacggcaccatcgccgccatcacagaaaaggagacgcacttc
tga
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