Marmota marmota marmota (Alpine marmot): 107150094
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Entry
107150094 CDS
T09644
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X2
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107150094 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107150094 (Mbd4)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107150094 (Mbd4)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
107150094 (Mbd4)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107150094 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107150094
NCBI-ProteinID:
XP_015350530
Ensembl:
ENSMMMG00000011043
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
METPSLGDGGPAPSMASGDLPVPEQQLDLREEDVAVGSERMGEDERQIAIKRISECQPLL
QEAIASSQLGDTTVTGCHKSVPCGWERVVKQRLSGKTAGRFDVYFISPQGLKFRSRSSLA
NYLHKHGETSVKPEDFDFTVLSKRGIRSRSKDSNVAALTSQLQNESHISTRNLRTRSRWK
KVFPLPSSNSELQDSRGLSSPESIQVLLEEDEGSNDGNSRKVSKSKRKVTILKGIPIKKT
KRRCRKSVSGSVESNDKGESPCDKTDAEREPVAQDSELGRTLCISDTRVSDKTLSVTDKV
KSTVKENSPNSGSDVHFEQITSGASDKLCSTKEAERNEKCGETDLESEESRSKGDQAERK
EHLHMDLLKCGSEIDSKRSEEDTTIPRTQVEKRKTSLYFSSKYNREALSPPRRKAFKKWT
PPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWKDV
SELLKPLGLYDLRAKTIIKFSEEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQVHPQ
DHKLNKYHDWLWENHEKLSLS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagacgccgagcctgggggacggcggacccgccccctcgatggcctccggtgacctc
ccagtcccagagcagcagcttgacctccgcgaggaagatgtggctgtggggtcggaaaga
atgggagaagatgaaagacaaatagcaataaaaagaatcagtgagtgtcagcccctgcta
caagaagccatcgcctcttctcagttgggtgacaccacagtgaccggatgccataagtct
gtcccgtgtggatgggaacgagttgtgaaacaaagattatctgggaaaacagcaggaaga
tttgatgtctactttatcagcccacaaggactgaaattcagatccagaagttcacttgct
aattatcttcacaaacatggagagacttctgttaagccagaagattttgattttactgta
ctttccaaaaggggcatcaggtcaagatctaaagacagcaatgtcgcagctctgacatcc
caactgcagaatgaaagtcacatttcaacccggaacctcagaacacgaagccggtggaag
aaagtgtttcctctgcccagtagtaattccgagctgcaagatagcaggggactgtccagc
cctgagtccattcaggtgcttttggaagaagatgagggtagtaatgatggtaactccagg
aaggttagcaagtccaaaaggaaggtgacaattttgaaaggaattccaattaagaaaacc
aaaagacggtgcagaaagagtgtttcaggttctgttgaaagtaatgacaaaggagaatct
ccatgcgacaagacagatgctgaaagagagcctgttgcccaagacagtgagctgggcaga
actttgtgcatctctgacaccagagtgagcgacaagaccctcagtgtgaccgataaagtc
aagagcaccgtgaaagaaaactcacccaattcaggatcagacgttcattttgaacaaata
acttctggcgcctcagacaaattatgttctaccaaagaagcagaacgcaacgagaagtgt
ggggagaccgatttagaatcagaggaaagcagatcgaaaggagaccaggcggaaaggaag
gagcatttgcatatggaccttttaaaatgtggctctgaaatagacagcaaacgctcagaa
gaagacaccaccatcccacggacacaggtcgaaaaaaggaagacgagcttgtatttttcc
agcaagtataaccgagaagctctcagccccccacgacgcaaagcctttaagaaatggacc
cctcctcggtcaccttttaaccttgtccaagaaacacttttccacgatccctggaagctt
ctcatcgcgacgatatttctcaatcggacatcaggaaaaatggcaattcctgtgctttgg
gaatttctagagaaatacccttcggctgaggtagcaagaacagcagactggaaagatgtg
tcagaacttctgaagcctcttggtctctacgatcttcgagccaaaaccattatcaagttc
tcagaggagtatctgacaaagcagtggaagtatccgatcgagcttcatgggattggcaaa
tatggcaacgactcttacaggattttttgcgtcaacgagtggaaacaggtgcacccccag
gatcacaagttaaataaataccatgactggctgtgggaaaatcatgaaaaattaagtctg
tcttaa
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