Marmota marmota marmota (Alpine marmot): 107150148
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Entry
107150148 CDS
T09644
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107150148 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107150148 (Xpc)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107150148 (Xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
107150148
NCBI-ProteinID:
XP_015350588
Ensembl:
ENSMMMG00000011669
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MGGGSASSASVVPVEPVEIEIETPEQAKSRQRREKMKMEFETHLRRMMKRFSKEVHENTH
KVHLLCLLANGFYRNSVCSQPDLLAIGLSIIPTRFTKVPPHDVDVSFLSNLVKWFIGTFT
VNPDLSTNEQDDLQTTLERRFAIYSARDDEELVHIFLLILRALRLLTRLVLSLQPIPLKL
SVAKGRRLSKGTCAEGAGDSSEAGSQVPGDPKTPKSSPRAGPGGASSKGPGQRAAKARKT
QAARPGRKRGDSSSEEGSQGQRPGKAPGRPRGRQRRVTSRVSYKEDSGSGRSSSSSDFEL
SSGEAHGSSGEDSEPGPPKRRKAPAPRKTKSGPQSDHCKRPAASSVSSSRKRGKKATGEA
EEAAEAAGRGLPGVDQWLEVFCERESRWVCVDCVHGVVGQPPACYRFATRPVAYVVGIDS
DGWVRDVTQRYDPAWMTATRKCRVDPEWWAETLRPYQSPQLERDKKEDSEFQAKHLGQPL
PTAIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSKDTWLKQA
RVVRLGEVPYKMVKGFSNRARKARLAEPQLQDHNDLALFGRWQTEEYQPPVAVDGKVPRN
EFGNVYLFLPSMMPIGCVQLNLPNLHRVARKLDIDCVQAVTGFDFHGGYSHPVTEGYIVC
EEFKDVLLTAWENEQALIEKREKEKREKRALGHWKLLTKGLLIREKLKLRYGAQTEAVAS
PADAGGGLSSDEEEGTSSQAEAARILAASWPQNRGAEDEEQKSRRPQTRRGRKAAAAHLF
PFEKM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggctcagcgtcctctgcgtctgtggtgcccgtggagcccgtggagatcgag
atcgagaccccggagcaggccaagagcagacagaggagggagaagatgaagatggagttt
gagacgcacctgcggaggatgatgaagcgcttcagtaaagaagtccacgagaacacgcac
aaggttcacctgctgtgcctgctggccaatggcttctatcgcaatagcgtctgcagccag
ccagacctgctcgccattggcctctccatcatccccactcgctttaccaaagtgccgcct
cacgacgtggacgtcagcttcctctccaacctggtgaagtggttcattgggaccttcacg
gtcaatccggacctgtccaccaacgagcaagatgacctgcagacgacactcgagaggagg
tttgccatctactccgcgcgagatgatgaggagctggtccatatatttctgttgattctc
cgggctctacggctcctgacccgcctggtactctctctccagccaattcctctgaagtta
tctgtggcaaagggaaggagactgtccaaggggacatgcgcagaaggtgctggagactcc
tcagaagccggcagccaagtcccaggagacccaaagacacccaagagcagcccaagagcc
ggaccagggggagcgtcatcgaagggccccggccagcgggcggccaaggccaggaagacc
caggcggccaggcccggcaggaagcggggcgactcctccagcgaggagggcagccaaggg
cagcggcccgggaaagccccggggcggcctcgtggccggcagcgacgggtgacctccagg
gtctcttacaaagaggacagcgggagtggccggtccagcagcagctctgactttgagctc
tccagcggggaggcccatggttcctctggggaggactctgaacccggccctccgaagcgg
aggaaggcccccgcccctcggaagacaaagtctgggccccagagtgaccactgtaagcgc
ccggcagcgtcgtcggtctcctcgagccgcaagagaggcaagaaggccactggcgaggcc
gaggaggccgcggaggccgcgggcaggggcctgcccggggtggaccagtggctggaggtg
ttctgcgagcgcgagtcccggtgggtgtgcgtggactgcgtgcacggcgtggtgggccag
cccccggcctgctacaggttcgccaccaggcccgtggcctacgtcgtgggcatcgacagc
gacggctgggtccgcgacgtcacgcagaggtatgaccccgcctggatgacggccacccgc
aagtgccgggtggatcccgagtggtgggccgagaccctgaggccctaccagagcccgcag
ctggagagggacaagaaggaggactcggagtttcaggccaagcacctgggccagcctctg
cccactgccatcggcacctacaagaaccaccctctgtacgccctgaagcggcatcttctc
aagtacgaggccatctaccccgagacggcggccatcctgggctactgtcgtggggaagct
gtctactccagggactgtgtgcacacgctgcactccaaggacacatggctgaagcaggcc
cgggtggtgcggctgggagaagtgccttacaagatggtgaagggcttctccaaccgcgcc
cgcaaggcccgcctggccgagccccagctgcaggaccacaatgacctggccctgttcggc
cgctggcagacagaggagtaccagcccccggtggccgtggacgggaaggtgccgcggaat
gagtttgggaacgtgtacctcttcctgcccagcatgatgcccatcggctgcgtccagctc
aacctgcccaatctgcaccgcgtggcccgcaagctggacatcgactgtgtccaggccgtc
acgggcttcgatttccacggaggctactcccaccctgtaaccgagggctacatcgtctgc
gaggaattcaaagacgtgctcctgacggcctgggagaacgagcaggccctcatcgagaag
agggagaaggagaagagggagaagcgggcgctggggcactggaagctgctgaccaagggc
ctgctcatccgcgagaagctgaagctgagatacggggcccagacggaggcggtggcttcc
cccgcagatgcaggaggtggcctgtcatccgacgaggaggaggggaccagctctcaagcc
gaagctgcccggatcctggctgcctcctggccccagaaccggggggctgaggacgaggag
cagaagtccaggcgcccccagaccaggagggggaggaaggcggccgccgcccacctgttc
ccctttgagaagatgtga
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