Marmota marmota marmota (Alpine marmot): 107150634
Help
Entry
107150634 CDS
T09644
Symbol
Casc3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03015
mRNA surveillance pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107150634 (Casc3)
09122 Translation
03013 Nucleocytoplasmic transport
107150634 (Casc3)
03015 mRNA surveillance pathway
107150634 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107150634 (Casc3)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107150634 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
107150634
NCBI-ProteinID:
XP_015351262
Ensembl:
ENSMMMG00000007763
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSLARGGGSCSGSAGGGGSGSLPSQRGGRGGALH
LRRVESGGPKSAEESECESEDGMEGDAVLSDYESAEDSEAEEGGEYSEEENSKVELKSEG
NDAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNP
AYIPRKGLFFEHDLRGQTQEEEIRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIAL
YGYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKPHRHQGPGGTLPPRTFINR
NAAGTGRMSAPRNYSRSGGFKEGRTSFRPVEAGGQHGGRSGETVKHETNYRSRRLEQTSV
RDPSPEADAPVLGSPEKEEAVTETSAVAPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVK
AVEEVPPPPEGLTSAPPVSETTPPPSTKTGNWEAPVDSAAGGLEQDVAQLSIAEQNWSPG
QPAFLQPRELRGVPNHIHMGAGPPPQFNRMEEMGVQGGRVKRYSSQRQRPVPEPPAPPVH
ISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGL
YPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQ
VYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEIVSRGSS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggatacggaagacgaagaatctggtgct
tcgggctccgacagtggcggctctctagcgcggggcggcgggagctgcagcgggagcgct
ggaggcggcggcagcggctctctgccttcccagcgcggtggccgcggcggggccctccat
ctgcggcgggtggagagcggggggcccaagagcgctgaggagtccgagtgtgagagtgaa
gatggcatggaaggtgatgctgttctctccgactatgaaagtgcagaagactcagaagct
gaagaagggggggaatacagtgaagaagaaaactccaaagtggaactgaaatcagaaggt
aatgatgctgcaaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaa
ggcaccgtgactggagagaggcaaagtggggatggacaggagagcacagaacctgtggag
aacaaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatcca
gcatacataccccggaaagggctcttttttgagcacgatcttcgagggcaaactcaggag
gaggaaatcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgttgggag
catgacaagttccgcgaagatgaacaggctccaaagtcccgacaggagcttattgctctt
tatggctatgatattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccgg
aaacctcgatttgggagtcctccccaaagagatccaaactggattggtgagcgtccaaac
aagccccatcgccatcagggtcctgggggtaccctaccaccaaggacatttattaacagg
aatgcagcaggtactggccgcatgtctgcacctaggaattactctcgatctgggggcttc
aaggaaggtcgtactagttttaggcctgtggaggctggtgggcagcatggtggccggtcc
ggtgagactgttaagcatgagactaattaccggtcacggcgcctggagcagacttctgtg
agggatccatccccagaagcagatgctccagtgcttggcagtcctgagaaagaagaggca
gtcacagagacatcagctgttgctcctgacacagcaccaccagcccctgacaggcctatt
gagaagaaatcttattcccgggcaagaagaacccgaaccaaagttggagatgcagtcaaa
gctgttgaggaggttccccctccacctgaagggctgacctcagcacctccagtctcagaa
accacccctcctccatctactaagacagggaactgggaagctccagtagattctgctgca
ggtggactagaacaagatgtggcacaactaagtatagcagaacagaattggagtccagga
caacctgcattcttacaaccacgggagcttcgaggtgtgccgaaccacatacacatggga
gcaggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagtg
aaacgctattcatcccagcggcagagacctgtgccagagcctcctgcccctcctgtgcat
atcagtatcatggagggacattactatgatccactgcagttccagggaccaatctatacc
catggtgacagtcctgccccactgcccccacagggcatgattgtacagccggaaatgcac
cttcctcacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctc
tacccaccaccagtgtccatgtctccaggacagccaccaccccagcagttgcttgctcct
acttacttttctgctccaggagtcatgaactttggtaatcccagttacccttatgctcca
ggagcactgcctcccccaccacctcctcatctatatcctaatacacaggctccatcacag
gtatatggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcc
ccaccccggaggactccccagccagtcaccattaagccccctccacctgagattgtaagc
aggggttccagttaa
DBGET
integrated database retrieval system
