Marmota marmota marmota (Alpine marmot): 107150952
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Entry
107150952 CDS
T09644
Symbol
Utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107150952 (Utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmma03009
]
107150952 (Utp4)
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107150952 (Utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_BBS7
NBCH_WD40
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
DUF7165
PQQ_2
Tor_FN3_1st
Motif
Other DBs
NCBI-GeneID:
107150952
NCBI-ProteinID:
XP_015351638
Ensembl:
ENSMMMG00000014246
UniProt:
A0A8C5ZJ54
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MGEFKVHRVRFFNYVPPGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEILEYDLQALNVKYALDAFGGPIWSMTASPSGSQLLVGC
EDGSVKLFQITPDSIQFERNFDRQKSRILSLSWHPSATHIAAGSIDYISVFDVKSGSAVR
KMIVDRQYMGVSKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLISNADVQ
SIAVADQEDSFVVGTAEGTIFHFQLVSVTSNSNEKQWVRTKPFQHHTHDVRAVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRCLISCSKKKQLLLFQFAHHLELWRL
GSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWIAYSTVSRVFLYRLNY
EHDNINLKRVSKMPAFLRSALQIMFSEDSKKFFVASNQGSLHIFQLLEGSFKHLHSFQPQ
SGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKHLKLHCTVPAYNFPVTALAIAPISNN
LVIAHSDQQVFEYSIPEKQYTEWSRNIQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTLLYNPLPPTNESDVFRRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagtacgtttctttaattacgtaccaccagggatccgt
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaagagaaatttttcccaggtcatgagtct
cgagctacagaagctctgtgttgggcagaaggacagcgactctttagtgctggactcaat
ggagaaatccttgagtatgacttacaggcattaaatgtcaagtatgccttggatgccttt
ggaggacctatttggagtatgactgccagccccagtggctctcaacttttggttggctgt
gaagatggatctgtgaaactatttcaaatcaccccagacagcatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcatccctctgctacccacatt
gcagctggctccatagactacattagtgtatttgatgtcaaatcaggtagcgctgttcgt
aagatgatcgtggacaggcagtacatgggtgtgtctaagcggaagtgtattgtatggggt
gtggcctttttgtccgatggcacagtcataagtgtggactctgctgggaaagtgcagttc
tgggactcagctactgggacacttgtcaagagccatctcatctcaaatgctgatgtgcag
tccattgctgtagcagaccaagaagacagttttgtggtgggcacagccgagggcacaata
ttccattttcagctggtttctgtgacttccaatagtaatgagaagcagtgggtgcggacc
aaaccattccagcaccacacacatgacgtgcgtgctgtggcccacagcccaaccgcactg
atatctggaggcactgacacccacctggttattcgtcctctcatggagaaggtagaggtg
aagaattatgatgctgctctccgaaaaatcacatttcctcatcgatgtctcatttcttgt
tcaaaaaagaagcagcttctcctcttccagtttgctcatcacttggaactttggcgactg
ggatccacagtggcaacaggcaagaatggtgatacccttccactctctaaaaatgcagat
catttactacatctcaagacaaagggccctgagaacattatttgcagctgtatctcccca
tgtggaagctggatagcctattccacagtgtctcgggtttttctctatcggctgaattat
gaacatgacaacataaacctcaaaagggtttccaaaatgcctgcattccttcgatctgcg
cttcagattatgttttctgaagattcaaaaaagttttttgtggcatcaaatcaagggtct
ctccacatctttcaactgttggaaggaagcttcaagcacctccattctttccagcctcag
tcagggacagtggaggccatgtgtcttttggcagtcagtccagatggtaattggctagca
gcatcaggaactagtgctggagtccatgtgtacaatgtaaagcatctaaagcttcactgc
acagtgcctgcttataattttccagtgactgctctggccattgcacccattagtaacaac
cttgtcatcgctcattctgaccagcaggtatttgagtacagtatcccagaaaaacagtac
acagagtggagccggaatatccagaaacaggggtttcaccatctttggcttcaaagagat
actcccatcacacacatcagttttcatcccaagagaccaatgcacatcctcctccatgat
gcctacatgttctgcatcattgataagtcgttgcctcttccaaatgacaagaccttactc
tacaatccacttcctcccacaaatgaatcagatgtcttccggaggcgcacagcccacgcc
tttaaaatttctaaaatatataagcccttactcttcatggatcttttggatgaaaggaca
cttgtggcagtagaacggcccctggatgacatcatcgctcagctcccaccacccatcaaa
aagaagaaatttggaacctag
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