Marmota marmota marmota (Alpine marmot): 107150986
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Entry
107150986 CDS
T09644
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107150986 (Ctcf)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107150986 (Ctcf)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107150986 (Ctcf)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107150986 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
107150986
NCBI-ProteinID:
XP_015351691
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPATTDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaggagtctgaaactttcattaaaggaaag
gagagaaagacttaccagcgacgccgggaagggggccaggaagaagatgcttgccactta
ccccagaaccagacggatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcctacccttcttcagatgaagactgaagtaatggagggt
acagtggctccagaagcagaggctgctgtagatgatacccagataataaccttgcaggtt
gtaaatatggaggaacagcctataaacataggagagcttcagcttgttcaagtacctgtt
cctgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaggtggtgaaagtgggggccaatggagaggtggagacactagagcaa
ggggaacttccacctcaggaagatccaagctggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagaacagcaggaaggtctgctgtcagaggtt
aatgcagagaaagttgttggtaatatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacgtgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacataagtgccatctctgtggc
agggcattcagaacagtcaccctcttgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttacaaacacacccacgagaagccatttaagtgttccatgtgtgattatgccagt
gtagaagtcagcaaattaaaacgtcacatccgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggagaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtggt
accatgaagatgcacatcttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagccagaaaaagtgatctgggtgtccacttgagaaagcagcat
tcctatattgagcaaggcaagaaatgccgttactgtgatgctgtgtttcatgagcgctat
gctctcattcagcaccagaaatcacacaaaaacgagaaacgctttaagtgtgaccagtgt
gattacgcttgtagacaggagaggcacatgatcatgcacaagcgcacccacacaggggag
aagccttatgcctgcagccactgcgacaagacctttcgtcagaaacagctccttgacatg
cacttcaagcgttatcatgaccccaactttgtccctgcggccttcgtctgttctaagtgt
ggaaaaacatttacacgtcggaacaccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggagaaaatggaggagaaacaaagaagagtaaacgtggaagaaaaaga
aagatgcgctctaaaaaagaagattcctctgatagtgaaaatgctgagccagatctcgat
gacaatgaggatgaggaggaacctgcggtagaaattgaacccgagccagaacctcaacct
gtgaccccagccccaccacctgccaaaaagcggagaggacgaccccctggcagaactaac
cagcccaaacaaaaccagccaacagccatcattcaggttgaagaccagaatacaggtgca
attgagaacattatagttgaagtaaaaaaagagccagatgccgagcctgtggagggagag
gaagaagaggcccagccagccaccacagatgcccccaatggggacctcacacctgagatg
atcctcagcatgatggaccggtga
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