Marmota marmota marmota (Alpine marmot): 107151038
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Entry
107151038 CDS
T09644
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107151038 (Taf1c)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
107151038 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
107151038
NCBI-ProteinID:
XP_048648365
Ensembl:
ENSMMMG00000011682
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MDFPRSLCPSLFMAGPLGMNDAPDLSFMCSWRDVLTLPESQPHDAKNAIPRLAKDLLWEP
LAPGPLPLMPPGPDSWDPGVTAQDLLFRGGRHYRRQPQVVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGTRSRSKKMTVVTVKRLLQDLGGHQPWGCPWAWISHRQRRFSILGGP
VLNKSVSSLLGKLLHEELALRWEQLLLDDAFTGGALAWVPGRTARVGQLVYPAGGALDKL
CFQEVSLTSGGNPRVFGDPGYIQLRGPVRQVVTCTVQGETLLAVRSDYHCAMWKVSRQEP
PTPLQTLQVEKGATGISLSPHLPGELAVCSRSGAVCMWTPQDGLQQVYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKIVDTQGPPGCGLLLFRGGAEASCQKGERVLVTHYLGQ
ASSDCLPPTLHLVCTQVSSPQPRGVSCVCLQSPARAGRSRGLPSPGLAATVVHCASAPVL
SVFQLSKAGDVFSQPFRLHRDTEPPEPPSDPDPGPTCPAPRATASPQDPPPKPLAPSWSP
QAIARCSHWLEALLEVPPAPAVWAAPTFSHRRLLGRMEPQKDAGRVPQGLWAAMAEGRLL
QQRDLGSLPRAEPPPAPESGPQDELTERLGAAWEGQGAAWWERRQFRALEPEGRAKRPKR
RSQLSSTFSSLTSGLDLPEASSPPHSPNQTSSETRPHSTGTLHSQELSQEPWTQGIPLER
RQTLRDYMAKLPLQNDTLGHSPILPTQAPSAQATPSQQHTPVLSGSRPPRKKARMGF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccagatccctgtgtccctcattgtttatggctggtccccttggtatgaat
gatgcccctgacctgtccttcatgtgcagctggagagatgttctgacgctgccagagtcc
cagccccacgatgccaagaatgccatccctcgcctggccaaggacctgctgtgggagccg
ttggcacctgggcccctgcccctgatgcctcctggtcctgactcctgggaccctggtgtg
actgcccaggacctccttttccgaggaggtcgccactaccggaggcagcctcaggtcgta
ctggatgtgactgaacagctcagccggttcctgtgggatcatggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaaactggagggtacccgtagccgctccaag
aagatgacagtggtcactgtgaagaggctgctccaggaccttggtggacaccagccctgg
gggtgtccctgggcatggatcagccaccggcagcgtcgcttctccatcctcgggggccca
gtgcttaacaagtcagtgtccagcctcctgggcaagctgctgcatgaggagctggccctg
cgctgggagcagctgctcttagacgatgccttcactgggggtgccttggcctgggtgccc
ggaaggacagcccgggtgggccagctggtctaccctgcgggaggtgccctggacaagctg
tgtttccaggaggtcagtctgacctcaggaggcaatcctcgggtctttggggaccctggg
tacatccagctgcgtggacctgtccggcaggtggtgacctgcaccgtccagggagaaact
ctgctggccgtccgctctgattaccactgtgccatgtggaaggtcagcaggcaggagccg
ccaaccccgctgcagacgctgcaggtcgagaagggggccacggggatcagtctcagccca
cacctgcccggggagctggccgtctgcagccgttctggagccgtctgtatgtggacccct
caggatgggctgcagcaagtctacaaagaccctgagacccttgtgttccgggacccttct
ccctggcgctgggcagacttcaccgcccaccctcgggtgctgacagtgggtgaccgcact
ggggtgaagatagttgacactcagggcccgccaggctgcggactgctgcttttccgtggg
ggggcagaggcctcctgtcagaaaggagaacgtgtcctggtcacccactatctggggcag
gccagctctgactgcctccctcccaccctccatctcgtctgtacccaggtgagcagcccc
cagcctcgcggggtctcttgtgtttgcttgcagagtcctgccagggctggcaggtcacgg
ggtcttccttctccaggtctggccgccactgtcgtgcactgtgcctctgcaccagtcctg
tccgtcttccagctctccaaggctggggacgtcttctcccagcctttccgcctccacaga
gacacggagccccccgagcctcccagcgacccggaccctgggcccacctgccctgcaccc
agggccacggcatcaccccaggacccacctcccaagcctctcgcaccttcctggagcccc
caggccatcgcccgctgtagccactggctagaggccctgctggaggtgccccctgccccg
gctgtgtgggctgcacccaccttctcccaccgccggctgctgggccgcatggagccgcag
aaggatgcagggagagtgccacagggactctgggcggccatggccgaagggcggctcctg
cagcagagggacctgggctcgctgcccagggcagagccgccccccgcgcctgaatcaggc
ccacaggatgagcttaccgagcgcttgggggcagcctgggaaggccaaggggctgcctgg
tgggagaggcggcagttcagggccttggagcctgagggccgggccaagcggcccaaacgc
cggtctcagctgtccagcaccttctcctcgctcaccagcggtttagatctcccagaggcc
agcagccctcctcacagcccaaaccagacgtcctcagagactaggcctcactctacaggg
acactgcactcccaggagttgagtcaggagccgtggacccagggcatccccttggagcgg
cggcaaaccctccgggactacatggccaaactgccacttcaaaatgacactctgggacat
agcccaatactccccacccaggcccccagtgcccaggccaccccctcccagcagcacacc
cctgtcctctccggctctcggccccccaggaagaaggcacgcatgggcttctga
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