Marmota marmota marmota (Alpine marmot): 107151064
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Entry
107151064 CDS
T09644
Symbol
Vps4a
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03250
Viral life cycle - HIV-1
mmma03272
Virion - Hepatitis viruses
mmma04144
Endocytosis
mmma04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107151064 (Vps4a)
03272 Virion - Hepatitis viruses
107151064 (Vps4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107151064 (Vps4a)
09143 Cell growth and death
04217 Necroptosis
107151064 (Vps4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107151064 (Vps4a)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107151064 (Vps4a)
Membrane trafficking [BR:
mmma04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
107151064 (Vps4a)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
Check point factors
Other check point factors
107151064 (Vps4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
IstB_IS21
RuvB_N
AAA_25
DUF815
AAA_17
AAA_2
AAA_18
AAA_33
NPHP3_N
nSTAND3
RNA_helicase
ResIII
AAA_24
PhoH
Mg_chelatase
AAA_7
AAA_28
NACHT
Parvo_NS1
bpMoxR
YhdB
Sigma54_activat
AAA_30
Motif
Other DBs
NCBI-GeneID:
107151064
NCBI-ProteinID:
XP_015351796
Ensembl:
ENSMMMG00000014211
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MGPSSWCCQKTQTHAQALDQGLSGSPGKQLFALFFQKAIDLVTKATEEDKAKNYEEALRL
YQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRNKEKHGKKPVKENQSE
GKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPH
LFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKN
LFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGAT
NIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSG
ADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSIVIDDLLTPCSPGDPGAIEMTWMD
VPSDKLLEPVVCMSDMLRSLATTRPTVNADDLLKVKKFSEDFGQES
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggcccatcctcctggtgctgtcagaaaacacaaacacatgctcaggccttagaccag
gggctttctggatctcctgggaaacagctatttgccttgtttttccagaaagccattgat
ctggtgacaaaagccacagaagaggataaagccaagaactacgaggaggcactcaggctc
taccagcatgctgtggagtacttcctccacgctatcaagtatgaggcacacagtgacaag
gccaaggagagcattcgagccaagtgcgtgcagtacctagaccgggcagagaagctgaag
gattatttacgaaacaaagagaaacacggcaagaagccagtcaaagagaatcaaagtgag
ggcaagggcagtgatagtgacagtgaaggggataatccagagaaaaagaaattgcaagaa
caactgatgggtgctgttgtgatggagaagcccaacatacgatggaatgatgtggctggg
ctggagggggccaaggaggctctcaaagaagctgtcattttgccaattaaattcccacac
ttgttcacaggcaagcgtaccccttggcgagggatactgctttttggaccccctggcaca
gggaaatcctatctggccaaggctgtggcaacagaggccaacaactctaccttcttctct
gtgtcctcctcagatttgatgtctaagtggttgggggagagtgagaagctagtcaagaat
ctctttgagctagccaggcaacacaagccctccatcatcttcatcgatgaggtggattct
ctctgtgggtcccggaatgaaaatgagagcgaggctgcccgaaggatcaaaacagagttc
ttggtccaaatgcagggggtggggaataacaatgatgggactctggttcttggtgccaca
aacatcccctgggtgttggattcagctattagaaggaggtttgaaaagcgcatttatatc
ccactgccagaagaagctgcccgtgcccagatgttccgattgcatcttgggagcactcca
cacaacctcacagatgccaacatccatgagctggcccggaagacagaaggctactcaggt
gcagacatcagcatcattgtgagggactcccttatgcagcccgtcagaaaagtgcagtca
gcaacacacttcaagaaggtctgtggtccttcccgcaccaaccctagcattgtgattgat
gacctcctgaccccatgctctccaggggacccaggggccatagagatgacttggatggat
gttcctagtgacaaactcttagagcctgtggtttgcatgtcggacatgctccggtctttg
gccaccacccggcccacagtgaatgcagatgacctcctgaaagtgaagaaattctcagag
gactttggacaggagagttaa
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