Marmota marmota marmota (Alpine marmot): 107151452
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Entry
107151452 CDS
T09644
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04517
IgSF CAM signaling
mmma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107151452 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107151452 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmma04812
]
107151452 (Sptbn4)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107151452 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
107151452 (Sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
107151452
NCBI-ProteinID:
XP_048646837
LinkDB
All DBs
Position
Unknown
AA seq
2566 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNLAARWESPDRGWEREPPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQIICNRVNHVHGCLAELQEQASRRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGGGGAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRR
GEELAAAGGLRGPGGQRPCSWRVWRSARLALGAAGSGWRRRRRGARGRLQEARALHQLVP
TLDALLDWLRDAYRLGSRRRLRSRRSVQSPPGTQLPLSPGRVXAHRGPVGGLRRQLATLG
GASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEK
EQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRS
CQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGAL
QWRLSGLEAALQALEPRQAALLEEAALLAARFPAQATRLHQGAEELGAEWGALASSAQAC
GEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGGEGPLPSSLEEADALLARHAALKEEVD
QREEDYARIVAASEALLAADGAELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAHV
YQLFLRDLRQALAVLRNQEVALSGVELPGTVESVEEAIKRHRDFLTTMELNQQKMQVAAQ
AAEGLLRQGNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDGW
IHEKMLMARDGSREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAAS
VRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGG
DLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRL
LEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTELGSGLQAVQQHIKKNQGL
RREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGLEQLQSAWAGLREAAERRQQVLDAA
FQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQL
SRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELE
HWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHT
AAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRL
TAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEV
LQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVL
MNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDRH
WEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAW
EERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEPL
ARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEVPGRVEPAAPPAAPENIAAETPG
TPAAAEQVRPRPERQESADRAEELPRRRRPERQESADQPEESARRRRPERQESLEHEVAH
SLTLGRYEQMERRRERRERRLERQESSEQETPIRGELAKGKATLADIVEQLQEKEAGPGL
PVGVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRS
RSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYK
DSKGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGW
LEAVAASVTEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttccaggggaggtggacaacatggagggcctgcccgcccccaacaacaac
aaccttgcagctcgctgggagagtccagacaggggctgggagcgggaacctccagctgct
tccacggcagctgcttctctctttgagtgctcacggatcaaggccttggcagacgagcgg
gaagccgtgcagaagaaaaccttcaccaagtgggtgaactcgcacctcgcccgcgtgggc
tgccacatcggggacctctatgccgacctccgggatggctttgtgctgacacggctcctg
gaagtgctgtcgggggagcagctgccgaggcccacacggggccgcatgcggatccactcg
ctggagaacgtggacaaggctctgcagttcctgaaggagcagcgtgtgcacctggaaaac
gtgggctcgcatgacatcgtggacgggaatcaccgactcacgctggggttggtctggacc
atcatcctgcgcttccagattcaggtcatcaaaattgaaacggaggacaacagagagacg
cgctcggccaaggacgctctgctcctgtggtgccagatgaagacggctggttaccccgag
gtcaacatccagaatttcaccaccagctggcgggacggcttggccttcaatgccctcatt
catcggcacaggcctgaccttgtggacttcggcaaactcaccaaatccaacgccaactac
aacctgcagagagccttccgcacagctgagcaacacctggggctggcgcgtctgctggac
cccgaagacgtgaacatggaggctcccgatgagaagtctatcatcacctatgtggtctct
ttctaccactacttctccaagatgaaggccctggctgtagaggggaagcggattgggaag
gttctggaccaggtgttggaggtggggaagatcatagagcgctacgaggagctggcagct
gagctgctagcgtggatccaccgcaccgtgggcctcatcagcaaccagaagtttgccaac
tcgctgagtggggtgcagcagcagctgcaagctttcacggcctattgcaccttggagaag
cccgtcaagtttcaggaaaaggggaacttggaggtactgctcttcagcatccagagcaaa
ctgcgtgcctgcaaccgtcgcctctttgtgcctcgggagggctgtggcatctgggatatt
gacaaggcttggggccaattggagaaggcagagcatgagcgggaggctgccctacgggct
gagctgatccggcaggagaagctggaactcctagctcagaggtttgaccacaaggtggcc
atgagggagagctggctgaatgagaaccagcgcctggtctctcaggacaactttgggtat
gagttgccagcagtggaggcagccatgaagaagcacgaagcgattgaggcggacattgca
gcctacgaggagcgggtgcagggtgtggcagaactggcccaggcgttggcagctgaaggc
tactatgatgcccggcgggtggcagcccagcgtgacagcgtcctgcgtcagtgggccctg
ctgactgggctggtaggtgcccggcggacccggctggagcagaacctggccctgcagaag
gtcttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggcggacgacctgttgcagaagcacggcctg
ctggagggggacatcgctgcccagagcgagagagtggaggctctcaacgctgcagcgctg
cgtttctcccagctgcagggctaccaaccctgcgacccgcagatcatctgcaaccgcgtg
aaccacgtgcatggctgtctagcggagctgcaggagcaggcgtcgcggcgacgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggcagagagctgg
gcccgggacaaggagcgcctcctggaggccgcgggcggcggcggcggcggcggcggcggg
gcaggcgccgcgggtggcgcgcacgacctgtccagcaccgcgcgccttctggcgcagcac
aagatcttgcagggcgagctgggcgggcggcgggcgctgctgcagcaggccctgcggcgt
ggcgaggagctggctgcggccggcgggctccgtgggcccggggggcagagaccgtgcagc
tggcgggtctggcggagcgcgcggctagcgctcggcgccgctggcagcggctggaggagg
cggcggcgcggcgcgagagggcggctgcaggaggcgcgggccctgcatcagttggtgccg
accttggacgcactgctggactggctccgcgacgcttaccgcctgggcagccgccggcgt
cttcggtcacgacgaagcgtccagtcgccgcctggcacgcagctcccgctctcaccgggg
agggtggnggcgcatcgcgggccggtgggcggcctgcggcgccagctagcgacactgggg
ggcgccagcggggccggacctctggtggtggcactacaggtgcgtgtggtggaggccgaa
cagttgttcgccgaggtgaccgaggtggccgcactgcggcgccagtggctgcgggacgcg
ctcgccgtgtaccgaatgttcggggaggtgcacgcgtgtgagctgtggatcggtgagaag
gagcagtggttacttgccatgcgtgtgcccgactcgctggacgacgtggaggtggtacag
caccgattcgagagtctggaccaggagatgaacagtctgatgggccgtgtcctggatgtg
aaccacacagtccaggagctagtggaagggggtcaccccagctcagatgaggtgcgctcc
tgccaggaccacctcaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaa
gaggagatgagcgcggtactgctggtggagaaccacgtgctggaggtagctgaggtgcgc
gcccaggtgcgcgagaagcggcgagccgtggagagcgcaccccgcgctggcggcgccctg
cagtggcgcctcagcggccttgaggctgctttgcaagcgctcgagccgcgccaggcggcc
cttctggaggaggcagccctgctggccgcgcgcttccccgcacaggcgacgcggcttcac
cagggcgcggaggagctgggtgccgagtggggcgcgctggccagctccgctcaggcctgt
ggcgaggcggtggcggcggccggacgattacagcgtttcctgcacgacctggacgctttc
ctggactggctcgtgcgcgcccaggaggcggcgggcggcggggagggccccctgcccagc
agcctggaagaggcggacgcgctgttggcgcgccacgcggcgctcaaggaggaggtggac
cagcgcgaggaggactatgcgcgcattgtggcggccagcgaagcgctgctggcggcagac
ggcgccgagctcggcccaggcctggcgctcgacgaatggctgccacacctggaacttggc
tggcacaaactgctcggcttgtgggaggcgcgcagagaggcgctggtccaggcgcacgtc
taccagctcttcctgcgcgacctacgccaagcgctcgctgtgctgcgcaaccaggaggtg
gcgctgtctggtgtggagctcccgggcaccgtggagtccgtggaggaggcgataaaaagg
caccgggattttctcaccacgatggagctgaaccagcagaagatgcaggtggccgcgcag
gcggctgagggcctgctgaggcagggcaacgcctacggggaacaggcccaggaggctgtg
gcccgactgctggagaagagccaagaaaaccagctacgggctcagcagtggatgcagaag
ctccatgaccagcttgggctgcagcatttcctccgagactgccacgagctggatggctgg
atccatgagaagatgctgatggcgcgagatggttctcgagaagatggccacaagctgcac
aagcgatggctccggcaccaggcgttcatggccgagctggctcagaataaggagtggctg
gagaagatcgagagggagggccagcaactgatgcaggagaagccggagttggcggcctcg
gtgcggaagaagctgggtgagatccggcagtgctgggcagagctggagagtaccacccag
gccaaggcccggcagctcttcgaagccagcaaggcagaccagctggtgcagagcttcgcg
gagctggacaagaagctccttcacatggaaagccagctccaagatgtggaccctggtggg
gacctggctactgtcaacagccagctcaagaaattgcagtcgatggagtcacaggtggag
gagtggtaccgcgaggtaggagagttgcaggcgcagacggcggcgcttcctttggagccg
gcgagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcggctggtgcgcctg
ctggagccgttgcaggagcgccgccgcttgctgctggcctccaaggagctgcatcaggtg
gctcacgacctagacgacgagctggcatgggttcaggagcggctgccactggccatgcag
acagaactaggcagtggtttacaggctgtccagcagcacatcaaaaagaaccagggcctg
cggcgggagatccaggcgcatgggccgcgcctggaggaggtgttggagcgcgcgggcgcg
ctggcctcgctgcgcagcccagaggcggaggccgtgcgccgtggcctggaacaactgcag
agcgcctgggcaggactgcgcgaggcggctgagcggaggcagcaggtgctggacgccgcc
ttccaggtggaacagtactacttcgacgtggccgaggtggaggcgtggctgggcgagcag
gagctgctcatgatgagtgaggacaagggcaaggatgaacagagcaccctgcagctgctg
aagaagcacctgcagctggagcagggcgtggagaactacgaagagagcatcgcgcagctg
tcgcgccaatgccgggcgctgctggagatggggcacccggacagcgagcagatcagccgg
cggcagtctcaggtggaccgcctgtacgtggcgctcaaggagcttggggaggaacgaagg
gtgggcctcgagcagcagtactggctgtaccagctcagtcgccaggtggatgagctagag
cactggattgctgagaaggaggtggtggctggttcaccagagctgggccaggacttcgag
catgtctcggtgctgcaggagaaattctcagagttcgccagtgagacgggcacggcagga
cgtgagcggctggcagctgtgaaccagatggtggatgagctgatcgagtgtggccataca
gcagcagccaccatggctgagtggaaggatgggctgaacgaggcctgggccgagctgctg
gagctcatgggtactcgggcccagctgctggccgcctctcgggagctgcataagttcttc
agtgatgcccgagagcttcaaggacaaattgaggagaagcggaggcgactgcctcgcctt
actgccccacctgagccaagacccagtgccagctccatgcaaaggaccttgcgagccttt
gagcacgatctgcagctcctcgtgtcacaggtacggcagctgcaggagggcgctgcccag
ctgcgaaccgtgtacgcgggcgagcacgcggaggccatcgccagccgggagcaagaggtg
ctgcagggctggaaagagctgctggcagcctgcgaggacgcccgcctgcacgtcagctcc
acggccgacgccctgcgcttccacagccaggcccgcgacctgctctcctggatggacggc
atcgcgggccagatcggggcagctgacaagcccagggatgtgtcatcggtggaggtgctc
atgaactaccaccagggcctgaagactgagctggaggcacgggtgcctgagctgactgcc
tgccaggagctggggcgctcccttctgctcaacaagagtgccatggctgatgagatccag
gcacagctggacaaactgggaaccaggaaggaggaggtgtcagacaaatgggaccgccat
tgggagtggctgcagcagatgctggaagtgcatcagtttgcccaggaggcagtggtggct
gatgcctggctgacagcccaggagccactcctgcagagccgggagctgggcagcagtgtg
gatgaggtagagcagcttatccggagacatgaggccttccgcaaggcagccgcagcctgg
gaagagaggttcagctctctgcgacgcctgaccacgattgagaaactcaaggcggaacaa
agcaagcaaccacccactcccctgctggggcgcaagttctttggggaccccacggaactg
gcggccaaggcggcgcctctactgcggccagggggctatgaaaggggcttggagcccttg
gcccgccgggcctcggacacgctgtcagccgaggtgcggacccgggtggggtacgtgcgc
caggagctcaagcccgagcgcctccagccgcgcattgaccggctgccggaggtccccggg
agggtagagcctgcggcccctccggccgcaccggagaacattgcagcggagactcccggg
acccctgcggctgcggagcaggtccggcccagaccggagcgccaggagtcagcggatcgc
gcggaggagctgccccggaggcggcggccggagcgccaagaatcggctgaccaacccgag
gagtctgcgcggaggaggagaccagaacgacaggaatccctggagcacgaggtggcacat
agccttacactgggccgctacgagcagatggagaggcggcgcgagcggcgcgagcggcgg
ttggagcggcaggagtccagcgaacaggagacgcccataagaggagagctggccaaaggg
aaggccaccctggctgacattgtggagcagctgcaggagaaagaggcgggcccagggctc
cctgttggggtgccgtcgctgcctcagcctcgcgagcttccccctggccgcctgcccaac
gggcttgagccgcccgagcggacacctcggccggatcggccgcgggcccgggaccggccc
aagccgcgacggcggccgcggccacgagagggtggtgagggcgggggaagccggcgctcg
cgctccgccccggcccagggcggctccgcccccgcgcctccgccaccgcccactcacaca
gtgcagcacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcatcc
aaccggtcgtgggtgagcctgtactgcgtcctcagcaagggggagctgggcttctacaag
gactccaaaggcccagcatcagggggaacacatggtggggagccactgctcagcctgcac
aaggccaccagcgaggtggctagtgactacaagaaaaagaagcatgtcttcaagctccag
acccaggatggcagtgaatttttgctccaggctaaagatgaggaggagatgaacggttgg
ctagaggctgtggctgcctcagtgacagaacacgcagagattgcacgctggggccagaca
ctacccacaacgtcctccacagacgagggcaaccccaagcgcgagggaggggagcgcaga
gccagcggacgccggaagtga
DBGET
integrated database retrieval system
