Marmota marmota marmota (Alpine marmot): 107151549
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Entry
107151549 CDS
T09644
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
107151549 (Shank1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
107151549
NCBI-ProteinID:
XP_048647173
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGQGPRGTRGQGSGTPGSLASARGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGAPGPPSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSTSGRLTPSPRGG
PFNPGSGGPLPASSPASFDGPSLPDTRVGGREKSLYHIPPVPPPAVAPAPPTLDSTASSL
TSYDSEVATLTQGAPSAPGDPPPPGPPAPAAPAPPVPQPGPDPPPGTDSGIEEVDSRSSS
DHPLETISSASTLSSLSAEGGGSAGGGGGGGGGAGVSSGPELLDTYVAYLDGQAFGGSGT
PGPPYPPQLMTPSKLRSRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALSA
CSGPSTASVAGGSVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLTQPQASA
LATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGPSYVPERTSSLQRQ
RLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVPPSAAAAPGATSPSASSSSTSTRH
LQGVEFEMRPPLLRRAPSPSLLPTSEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGG
AGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFD
VADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccctgccacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccagggcaaggccctcgggggacc
cggggccagggcagtgggacacctggtagcctggcctctgcccgaggcctccagggtcgc
tccatgtctgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctgcgcttcaacccggatgccaccatctggacagccaag
cagcaggtgctctgtgccctcagtgagagcctgcaggatgtgctcaactacggcctgttc
cagccggccacctcaggccgggatgccaatttcctggaggaggagaggctgctgcgggag
tacccccagtcctttgagaagggggtaccctacctggagttccgatacaagacccgcgtt
tacaaacagaccaatctggatgagaagcagctggccaagttgcacacaaagacggggttg
aagaagttcctggagtacgtgcagcttgggacgtcagacaaggtggcgcgcctgctggac
aaggggctggaccccaattaccatgactcagattcgggagagacccccttgaccctggcg
gcccagactgaaggctcggtagaggtgattcgaactctgtgcctgggtggggcccacatt
gacttccgggcccgggatggcatgacagcactgcacaaggccgcgtgtgcccggcattgc
ctggctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgtggg
ctgacccctctgttccatacagccatggtggggggcgacccccgctgctgtgaactgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggccactctcagcacctggaacacctgctcttctatggggctgagcct
ggagcccagaacgcctcagggaacacggccctgcacatctgtgctctctacaacaaggag
acctgtgcaaggatcctcctctatcgaggcgccaataaggatgtgaaaaataacaatgga
cagacacccttccaggtggcagtcattgctggcaattttgagctgggggagttgatccgc
aaccatcgggaacaggacgtggtgcccttccaggagtcccccaagtatgcagcacggaga
cggggacccccaggtgcagggctgacggtgccccccgcgctgctgagggccaacagcgat
accagcatggcactccctgactggatggtgttctccgccccgggggcctcgtcctctggg
gcccctggcccaccctcgggaccccagggccagtctcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggtgcccgggcccgctcccca
tcccgagggaggcaccccgaggaggccaagaggcagccccgaggacgacccagctccagc
gggacgccccgggaagggccagccgggggcacagggggctcagggggccctgggggctcc
ctgggcagccgcgggaggcggaggaagctctactcagcagtacctggacgctccttcatg
gctgtcaagtcgtaccaggcccaagctgagggggaaatctccctgagcaagggcgagaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccttctgactgcttggaagaggtggcaaaccgttcccaggagggaaagcaa
gaaagccgcagtgacaaagcaaagagactcttccggcattatactgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaagacagttttactgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tacctggagtcagtggacgagggcggcgtggcatggagggctggacttcgaatgggagac
ttcctcatcgaggtgaatgggcagaacgtggtgaaggtcggccaccgacaggtggtaaac
atgatccgccaagggggcaacacactgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgtccataagaaagcaccccagcaggctaagcggctcccgccccca
gccatctcccttcgttccaagtctatgacctcagagctggaggaaatggtctccccttgg
aagaagaagagtgagtacgagcagcagcctgcgccagtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggacgaaatcttggcggcagctcaacagacc
atcagtgcaagcgagagtcctgggcctggtggcctggcgtccctgggcaagcaccggccc
aaaggcttctttgccaccgagtcgagctttgatccccaccaccgctcccagccaagttat
gagcgtccttctttcctgcctccgggacctgggcttatgctccggcaaaaatccattggg
gctgcagaggatgatagaccctacctagcacccccagccatgaagtttagccgcagcctg
tctgtgcctggttcggaggacatccccccaccacccacgacgtccccaccagagcctccc
tacagcacacctccggccccctccacctccggccgccttaccccctccccccggggtggc
cccttcaacccaggctcaggtggacccctccccgcctcctcccccgcgtcctttgatgga
ccctcccttcccgacacccgcgtggggggccgtgagaagagcctgtaccacatacccccg
gtgccacccccggctgtggcccccgcccctcccaccctggactccaccgcatcgagcctg
acgtcctacgacagtgaggtggccacactgacccagggggctccttcagctcctggagac
ccccctccaccaggccctccggccccagcagcaccggctcccccagtccctcagccgggt
ccagaccctccaccaggcacggattctggtattgaggaggtggacagtcggagcagcagt
gaccaccccctggagaccatcagtagtgcatccacgctgagcagcctgtctgctgaaggt
ggtgggagcgcagggggtggtggaggtggcgggggtggggctggtgtgtccagtgggccc
gagcttctggacacctatgtggcctacctggacggccaggccttcggggggagcgggact
cctggcccaccgtaccccccacagctcatgactccctctaagctccggagccgggcactg
ggggccagtggagggttgcggcctggccccagtgggggactgcgagaccctgtcacccct
accagccccaccgtctcggtgacaggggctggaactgatgggctgctggccctgagtgct
tgctcaggaccctcgacagcaagtgtagctgggggttcagtggcagtagagccagaagtc
ccaccggtgcccttgccaacggcctcctccctgcctcggaagctgctgccctgggaggag
ggccccggcccgccaccaccacccctgcctgggcctctgacccagcctcaggcctcagcc
ttggccacagtaaaagccagcatcatcagtgaactcagctccaagctccaacagtttggg
ggctcctcggcagctggaggggctctgccttgggcccggggaggcagcgggggcagcggg
gacagtcaccacgggggacccagctacgtccccgagaggacctcctccctacagcggcag
aggctctccgacgactcccagtcctccctcctctccaaaccagtcagcagcctgtttcag
aactggcccaaaccacctctgccaccactccccactggaactggtgtgcccccttcagca
gctgcagccccaggggccacctcaccctcagcctcctcctcctccacgtccacccgccac
ctccagggcgtggagttcgagatgcggccccctctgctccggcgggcccccagcccctcg
ctgctgcccacctcggagcacaaggtcagccctgcgcccaggccctcgtccttgcccatc
ctgccttctggacccctctatccgggcctctttgacatccgtggctcccccaccggaggg
gcaggaggctctgctgacccgtttgcccctgtctttgtgccgccacacccggggatgtcc
gggggccttggaggagctctgtcaggggcatcgcgctccctctcacccacccgcctgctt
tcgctgcccccggacaagccgtttggcgctaaacctctggggttctggaccaagttcgat
gtggccgattggctcgagtggctgggcttggctgagcaccgtgcccggttcctggaccac
gagatcgatggctcccacctgcccgccttgaccaaggaggactatgtggatctgggtgtg
accagggtgggccaccgcatgaacattgaccgggctctcaaattcttcctggagaggtga
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integrated database retrieval system
