Marmota marmota marmota (Alpine marmot): 107151592
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Entry
107151592 CDS
T09644
Symbol
Npas1
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107151592 (Npas1)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107151592 (Npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
107151592
NCBI-ProteinID:
XP_048647190
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MIGDNAFSGAPTPACIPGTEGLSGALLEDFLGPSVGAWLTPPGQKLSSELPKDKDTETMN
IHPFHRWETEAHEGSLEMASVILGRGLVFVLGASAGGGLGRGVETRWAGSRQTPPPPGGA
VRGLQVCEAAVGAESQAPQPAEPRRPRVYGVAPLRRLAGLTPRLESAPRPVRAVGPPAGL
ASGRRGPATLVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTG
SSVFDYIHPGDHSEVLEQLGLRTPTPGPPXPPSVSSSSSSSSSSSLADAPEIETSPVEGP
ASSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAE
LPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDL
LDKGQVMTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAECGQTPLDA
FQLPASVPCEDTSSPGPEHTEREPTVERKQVVPADKDEAPQTRSKRIKVEPAPRERQARE
DSGDEEPSERPAPPRREFTSVIRAGALKQDPVRPWGLAPPGDPPPALLHAGFLPPVVRIG
YDR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatcggggacaatgccttcagtggtgcccccacccctgcctgcatcccaggcactgaa
gggttatctggagcccttctggaggacttcctgggtcccagtgtgggggcctggctgaca
ccccctggccagaagttgtcctcagagctgccgaaggacaaggacacagagaccatgaac
atccacccatttcacaggtgggagactgaggcccacgaagggagcctggagatggcgtca
gtgattctgggacggggcctcgtctttgtgttgggcgcgagtgctggcggtgggctgggc
cgaggggtggagacgcggtgggcggggtcccgacagaccccgcccccgcccggcggcgct
gtccgcggtctccaagtctgcgaggccgcggtgggcgccgagagccaggcgccacagccc
gcggagccccgtcgccccagggtctatggagtggcccctctgcgccgcctggccggcctc
acgccgcgcctggagtctgccccgcggccagtgcgggcggtgggaccaccggccggcctc
gcctcgggccgccggggccccgcgacgctggtctccgaggtcttcgagcagcacctggga
ggacacatcttgcagtccctggacggctttgtgttcgccttgaaccaggaaggaaaattc
ctctacatctcagaaacagtttccatctatctgggcctctcacaggtggagctgactggc
agcagcgtcttcgactacatccaccccggggaccactcggaggttctggaacaactgggg
ctgcggaccccgacccccgggcccccanccccgccctccgtctcgtcctcttcctcctcc
tcctcttcctcctcgctggcggatgccccggagatcgagaccagccctgtggaggggccc
gcctcctcccgggtgcaggagcgctccttcttcatccgcatgaaatccaccctcaccaag
cgggggctgcacgtcaaggcctcggggtacaaggtcatccacgtgacagggcgcctacgg
gcccgggcgttgggcctggtggctctgggtcacaccttgcccccagccccactggctgag
ctgcctctgcatggacacatgatcgtcttccgcctcagcctgggtctcaccatccttgct
tgtgagagcagagtcagcgaccatatggacctggggccctcagagcttgtgggccgcagc
tgctaccagttcgtccatggacaggatgcaaccaggatccgccaaagccacctggacctg
ctggacaagggccaggtgatgaccggttactaccgttggctgcagcgtgctgggggcttc
gtgtggctgcagtctgtggccaccgtggctggcagcgggaagagccctggggagcatcac
gtgctctgggtcagccatgtgctcagccaagcggagtgtggccaaacacctctggatgcc
ttccagcttccagccagtgtgccctgtgaggacacatccagcccagggccagagcacaca
gagcgggagcccacggtggagaggaagcaggtcgtccccgccgacaaggacgaggccccg
cagacgcgcagcaaacgcatcaaggtggaaccggctcccagggaaaggcaagcccgcgag
gacagtggggacgaggagccctcggaacggccggccccaccgcgaagggagttcacgtct
gtcatccgggccggggcgctgaagcaggatccggtgcggccgtggggcctggcgccgcca
ggggaccccccacccgccctgctccacgcaggcttcctgccgcccgtggtgcggattggt
tatgaccgatag
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