KEGG   Marmota marmota marmota (Alpine marmot): 107151820
Entry
107151820         CDS       T09644                                 
Symbol
Polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03020  RNA polymerase
mmma03420  Nucleotide excision repair
mmma05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107151820 (Polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107151820 (Polr2i)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    107151820 (Polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmma03021]
    107151820 (Polr2i)
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107151820 (Polr2i)
Transcription machinery [BR:mmma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107151820 (Polr2i)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107151820 (Polr2i)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 107151820
NCBI-ProteinID: XP_015352719
Ensembl: ENSMMMG00000004579
UniProt: A0A8C5YXS4
LinkDB
Position
Unknown
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaaccagatgggacctacgaaccgggcttcgtgggcattcgattctgccaggaatgt
aacaacatgttgtaccccaaggaagacaaggagaaccgcattctgctttatgcgtgccgg
aattgtgattatcagcaggaagccgataacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgaactgacccagatcattgctgatgtgtcccaggaccccacgttaccacgg
accgaggaccatccatgccagaagtgcggccacaaggaggcggtgttcttccagtcacat
agtgcccgggccgaagatgccatgcgcctgtattatgtatgtactgccccacactgtggc
caccgctggaccgagtga

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