Marmota marmota marmota (Alpine marmot): 107151865
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Entry
107151865 CDS
T09644
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03420
Nucleotide excision repair
mmma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107151865 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
107151865 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107151865 (Ercc8)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107151865 (Ercc8)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107151865 (Ercc8)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
107151865 (Ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Cytochrom_D1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
107151865
NCBI-ProteinID:
XP_015352765
Ensembl:
ENSMMMG00000008052
UniProt:
A0A8C5Z2X3
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MLGFLSARQAGLEDPLRFQRTESTRRVLGLELNKDRDIERIHGSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQLYYTCKAVCSIGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVKLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSRVKLWDVRRASGCLINLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFTVS
CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKNVDCCVFQSNFQELYSGSRDCNILS
WVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctttttgtccgcgcgacaagcgggtttggaagaccctctgcgcttccagaga
acggagtccacacggagggttttgggactggagttaaacaaagacagagatattgaaaga
atccatggaagtggagttaacacccttgacattgaacctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgaccttgagaactccagcagacaactt
tattacacatgtaaagcagtgtgttccatcggcagaaaccatcctgatgttcacaagtac
agtgtggagactgttcagtggtatcctcatgacactggaatgttcacatcaagctcattt
gataaaactctgaaagtatgggacacaaatacattacaaactgcagatgtatttaatttt
gaagaaacagtttatagtcatcatatgtctccagttgcgaccaagcactgtttggtagca
gttggtactagaggacccaaagtaaaactttgtgacttaaagtctggatcctgttctcat
attctgcagggtcacagacaggaaatcttggcagtttcctggtcaccacgttatgagtat
atcttggctactgcaagtgctgacagtagagtaaaactatgggatgtgaggagagcttca
ggatgtttgattaatcttgatcagcataatgggaaaaagtcacaagctgctgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcatctc
ctcactgttggtacagataatcgaatgaggctctggaatagttccaatggagaaaacaca
ctagtgaattatggaaaagtttgtaacgacagcagaaaaggattgaaattcactgtctcc
tgcggctgcagttcagaatttgtttttgtgccatatggtagcaccattgctgtttataca
gtttactcaggagaacagataactatgcttaagggacattataaaaatgttgactgctgt
gtatttcaatctaatttccaggaactttatagtggtagcagagactgcaatattctttct
tgggtaccatccttatatgaaccagttcccgatgatgatgagactacaaccaaatcgcag
ttaaatccagcttttgaagatgcctggagcagcagtgatgaggaaggatga
DBGET
integrated database retrieval system
