Marmota marmota marmota (Alpine marmot): 107152088
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Entry
107152088 CDS
T09644
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107152088 (Gapvd1)
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107152088 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
107152088
NCBI-ProteinID:
XP_015353073
Ensembl:
ENSMMMG00000017880
UniProt:
A0A8C5ZUD2
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPYQQEKLFGEKGS
DRFRQKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRTNMLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEITHGAHQLTSPPSQAESLLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHMLTLAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGATSLVAAPHSSSSSPSKDSSRGEI
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPIP
RLTAQAQVAEDILDKYRNAIKRTSPSEGAMANYENAEVMGDGESAHDSPRDETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctcgatattcatactttggcacatcacctcaagcaggagcgcttatatgta
aactctgagaaacagctcattcagaggctcaatgcggatgtacttaagacagctgaaaag
ttgtatcgtacagcatggattgcaaagcaacagagaattaatttggatcggcttatcata
accagtgctgaagcttcccctgctgaatgttgccagcatgccaagattttggaagataca
cagtttgttgatggttataagcagttaggatttcaggagactgcttatggagaattcttg
agtagattaagggagaatcctcgtcttattgcctcctctttggttgctggagaaaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctctctatatggcaattgt
attatgcaagaagatgaaagctacctccttcaggttttgcgatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttccgagggactcttttctgccaaacttttcctcacagctacttta
cacgagccaatcatgcaactgcttgttgaggatgaagatcacctggaaacagatccaaac
aagttaattgaaagattctccccttatcaacaggaaaaactctttggagagaaaggctca
gatagatttaggcaaaaggttcaagagatggtggaatccaatgaagccaaactggtggcg
ttggtgaacaaatttattggttatctcaaacagaatacatattgctttccacatagtttg
aggtggattgtgtcacaaatgtacaaaactctttcctgtgtagacagactggaagtcgga
gaggtcagggcaatgtgtactgatctcctcttggcttgctttatttgtcctgcagttgtc
aatccagaacagtatggcataatttctgatgctcctattaatgaagtggcaagatttaat
ctaatgcaggttggccgccttctgcagcagttagcaatgactggctctgaagagggagat
cctcggacaaaaagcagccttggaaaatttgacaaaagctgtgttgctgctttccttgat
gttgtgattgggggccgtgcagtggagacccctccaatgtcctctgttaatcttctggaa
gggttgagcagaactgtggtttatataacctacagtcagcttattactctggtaaatttc
atgaagagtgtgatgtctggagatcaactgagagaagatagaatggctcttgacaattta
ttggcaaatctaccccaggctaagccaggaaaaagcagcagtttagaaatgactccttat
aatacccctcagctctccccagcaaccactccagcaaataaaaagaatcgattacctata
gcaactcggagcagaagccgcactaatatgctaatggacctacatatggaccatgaagga
tcatctcaagaaaccatccaggaggtccaaccagaagaagtgttggtcatttccttaggg
acaggtccccagcttactccagggatgatgtcagaaaatgaggtcctaaacatgcagctt
tccgatggaggacaaggagatgtccctgttgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggcatatctgaaggtccttca
aatcggtccaattcagtgtcctctctagacctggaaggagagtctgtatcagaacttgga
gcaggaccttctgggagtaatggagttgaagctctacagctgttagaacatgaacaagct
acaacacaagataatcttgatgataagctaaggaagtttgagattcgtgacatgatggga
ctaacagatgatagggacatatcagaaacagtgagtgagacctggagtacagatgtcttg
ggaagtgactttgaccctaacatcgatgaagatcgcttgcaagaaattgcaggtgcagcc
gcggagaacatgttaggcagtttgctgtgcctcccaggttcagggtcagtacttcttgac
ccctgcactggttctaccatctcagagacaacaagtgaagcttggagtgtagaggtacta
ccaagtgactcagaggccccggacctaaagcaggaggagcgcctacaagagctggagagc
tgttctggactgggcagcacatctgatgatacagatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgtcgtgtcgggtataagtgcaacctctgaggatattcctaat
aagattgaagacctaagatctgagtgtagctctgattttgggggtaaagattctgtcact
agtccagacatggatgaaataactcatggcgcccaccagctgacctctcctccttctcag
gcagagtctctgctcgccatgtttgatcctctgtcttcacatgaaggggcttctgctgta
gtaaggccaaaggttcactatgccaggccatcacatccacccccagaccccccgatcctg
gaaggagcagtgggaggaaatgaggccaggttgcccaactttggttcccacatgttaact
ctagctgaaatggaggcttttaaacaaaggcattcttaccctgagagactagttcgaagc
aggagctctgatatagtatcttctgtccggagacccatgagtgaccccagctggaaccgt
cgtccagggaatgaagagcgagaactccctccagctgcagccattggtgctacttctttg
gtggctgcacctcactcatcatcgtcgtccccgagtaaggactcttcaagaggagagatt
gaagaacgcaaagatagcgatgacgagaagtcagacaggaacagaccttggtggagaaaa
cgttttgtttcagccatgcctaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatctggggcctgacagattctcaacactcacagatgatcccatccct
aggctcactgcacaagctcaggttgctgaggatattctggacaaataccggaatgccatt
aaacggaccagccccagtgaaggagcaatggcaaactatgaaaatgcagaggtcatgggt
gatggtgaaagtgcacatgattctcctcgggatgaaacactacagaacatctcagctgat
gatctcccagactctgcgagccaagcagcccaccctcaggattcagctttttcttataga
gatgcaaaaaagaaactgaggcttgctctttgctctgcggactctgttgccttcccagtg
ttaacccattcaacaaggaacggattaccagaccatacagacccagaagataatgaaatt
gtatgcttcttaaaagttcaaatagctgaagcaattaatttacaagataagaacttaatg
gctcaacttcaagaaacaatgcgttgtgtatgccgttttgataataggacatgtaggaaa
ctgctggcatccattgctgaggactacaggaaaagagccccatatatcgcttacctcact
cgctgtcgacaaggactgcagactacgcaggctcacctggagaggctcttgcaaagggtt
ttacgggacaaagaggtagccaatcgatattttaccactgtctgtgtgaggttactgctt
gagagcaaagaaaagaagatcagggaattcattcaagattttcagaaactcacagcagct
gatgataaaactgctcaggtagaagattttctacagtttctttatggtgcaatggcccag
gatgtcatatggcaaaatgcaagtgaagagcagctgcaggatgctcagctggccatcgaa
cgaagtgtgatgaatcgcattttcaagcttgccttctaccctaatcaggatggggatatc
cttcgtgaccaggttcttcatgaacatatccagagattgtctaaagtagtgactgcaaat
cacagagctcttcagatcccagaggtttatcttcgggaagcaccgtggccatctgcacaa
tcagaaatcaggacaataagtgcttataaaaccccccgggacaaagtgcagtgcatcctg
agaatgtgctctacaattatgaacctcctgagcctggccaatgaggactctgtccctgga
gcagatgactttgttcctgtgttggtgtttgtgttgataaaggcaaacccaccttgcctg
ctgtccactgtgcagtacatcagcagcttctatgccagctgtctgtctggagaagagtcc
tattggtggatgcagttcacagcagcagtagaattcattaaaaccattgatgaccgaaag
tga
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