Marmota marmota marmota (Alpine marmot): 107152114
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Entry
107152114 CDS
T09644
Symbol
Rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107152114 (Rc3h2)
04121 Ubiquitin system [BR:
mmma04121
]
107152114 (Rc3h2)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107152114 (Rc3h2)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107152114 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107152114
NCBI-ProteinID:
XP_015353100
Ensembl:
ENSMMMG00000018470
UniProt:
A0A8C6EWU8
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALESVKKVGKVGTNGQNAAGPSAE
SVTENKIGSPPKTPVSNITATSAGPSNVGTELNSVPPKSSPFLTRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPVSSTLPVATQSPTPPSPLFSVDFRTDFSETVSGTKFEEDHLSHYSPWSC
GTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDATSS
AHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQSEQIEEILDMQ
LGISSQNDQLLNGTAVENGHPVQQHQKEPLKQKRQSLGEDHVILEEQKTILPVTSCFNQP
LPVSISNASCLPITTSVSVGSLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtacttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggaaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtgaactgt
cagctggtggaggaagaaggtcgtgtcagagccatgagagcagcacgttcacttggagaa
agaactgtaacagaactgatattacagcaccagaatcctcagcaattgtctgccaatttg
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcattagaagatggttctgctctctccaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttactaaaagagatgaagac
tcttccctgatgcagctaaaggaggaattccggagttatgaggcactacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggacttcgtatttcacctgaacagtgg
tcctcacttttatatggtgacttggctcataaatcacacatgcaatctatcattgacaag
ctgcagtctccagaatcatttgcaaagagtgttcaggaattgacaattgttttgcaacga
accggtgacccagctaacttgaatagactaaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcgcctacctgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacagaattatagcagaaaaggccat
gagacacctcaacctcagccaaatagcaagtacaagactagtatgtgccgagatttgcga
cagcaaggggggtgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcgactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaaccgggaaaattgttccaagtacaaatggaatatcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtaccgacagtactttaagagctctggagtct
gtgaagaaagtggggaaggttggcactaatggtcagaatgctgctgggccctctgcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaacataactgct
acctcagctgggccctctaatgttggaacagaactgaattctgtgcctccaaaatccagc
ccatttctcactagagtaccagtataccctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccttttgaagtcccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctcctcagcagtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgtccacccatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcatctgtctatcagacatctttgagggaaagatataactcgttagat
ggatattattcagtggcttgtcagccaccaagtgagccaaggacgacggtgcctttacca
agggaaccttgtggtcatttgaaaaccagttgcgaggagcagatacgaagaaagccagat
cagtgggcacagtaccacactcagaaagcacctgtctcttcaactcttcctgttgcaaca
cagtcaccaacaccaccttctcctctattcagtgtagacttccgcacagatttctctgag
actgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtcctgt
ggtaccataggctcctgcataaatgccatcgattcagagccgaaagatgtaattgctaat
tcaaatgctgtgttaatggacctggacagtggagatgttaagagaagagtgcatttattt
gaaactcagagaaggacaaaagaagaagatccaataattccctttagtgatggacctatc
atctcaaaatggggtgcaatttcccgatcttcacgcacaggttaccatactacggatcct
gtccaggctactgcttcccaaggaagtgcaactaagcccatcagcgtatcggattatgtc
ccttatgtcaatgctgttgattcaaggtggagttcatatggcagtgatgccacatcatca
gcgcactatattgaacgggatagattcattgttactgatttatctggtcatagaaagcat
tccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattactt
cttcagagggaggctaatgctcttgccatgcaacagaagtggaattccctggatgaaggc
cgtcaccttaccttaaatcttctaagcaaggagattgaactgagaaatggagagagtgat
tataccgaagatgcagcagatactaagcctgatagagatattgagttagagctttcagca
cttgatactgatgaacctgatggacaaagtgaacaaattgaagaaatcctggacatgcaa
cttggtatcagttctcaaaatgatcagttgctgaatggaactgcagttgaaaatgggcat
ccagtccagcagcaccagaaggagccactaaagcagaagagacagagtttaggtgaagat
catgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttaaccagcca
cttccagtgtctattagcaatgcaagttgcctccccatcaccacatcggtcagtgttggc
agcctcattctgaaaactcatgttatgtcggaagataaaaacgactttttaaaacctgtt
gcaaatgggaagatggttaacagctaa
DBGET
integrated database retrieval system
