Marmota marmota marmota (Alpine marmot): 107152161
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Entry
107152161 CDS
T09644
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04015
Rap1 signaling pathway
mmma04510
Focal adhesion
mmma04722
Neurotrophin signaling pathway
mmma04910
Insulin signaling pathway
mmma05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
107152161 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107152161 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
107152161 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
107152161 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
107152161 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
107152161
NCBI-ProteinID:
XP_048668799
Ensembl:
ENSMMMG00000011529
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MGNAVEKQKPLRRSQLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
IPEKPVNKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAVDKKVLEMLPGSASKVLEAVLPLVQTDPRIQHSSALSSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
SPAGKPDGQPELPLTDREMEILNKATGVSPSTELLPDSTDEEVAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFEVDCYAQRRLSGGSHSYGG
ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNTDQI
PQHVACNLSPLPESLGETGSPFPSNPFQLPLGSCPQSEGPSALGRQTDTPPALPEKKRRS
AASQASDSAGCRASYERHPSQYDNIPEDDLQNPAPAPALPYTPFAAVLPFQQGGSSAPIE
FVGDFTAPESAGDPEQPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
KLLMEVYGFNDSFSGGDSLQELAPPPALPPKQRQLQASYAASSFSSVSYCVQQTKVAFTP
EDGSATQGLSVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVQPFLPPTSSSSP
HFPPVHPSQSSDLAVPAVAGPPPSTMTGPLSSSQESSFHGNTVCLPSETSCADSSENASE
EAGEGEYVSLYSSGQSSEELAPSRGESPAGKDGHSRDPSAVGSAPGKDSRDGGERSPKSP
DTLESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKRLLRCANSDQPLAARGVAARP
GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
QQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
EEKT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctgtagaaaaacagaagcccttgagacgaagccaactgtgcccctggaaa
caagactcccagcgctctcatctctcctccttcaccatgaagctgatggacaaattccac
tcgcccaaaatcaagagaacaccatcaaagaagggaaagcctgccgaggtgtctgtgaag
attccggagaagcctgtgaacaaagaggcaagagacagatttctaccagagggctaccct
atccccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttcc
aggtctcagaggcagaagaacctgagctggctggaggagaaggagaaggaagtcgtcagt
gccttgcgctactttaagaccattgtggacaaaatggctgtagacaagaaggtgctggag
atgctcccaggctctgccagcaaggtgctggaggccgtcttacctctggtgcagactgac
cctcgtatccagcacagctcagccctctcctcctgctacagccgagtgtaccaaagtctt
gccaacctcatccgttggtctgaccaggtgatgctggaaggcgtgaactcagaagacaag
gagatggtgacaactgtgaagggagtcatcaaagctgttctggatggagtaaaggagctg
gtcaggctgaccatcgagaagcaagggcggccatctccaacaagcccagtaaagcccagt
tccccggccggcaagcctgacggccagcctgagctccccctgacagaccgagagatggag
attctaaacaaggcgacaggtgtgtctccgtcaactgagctgctcccagactccacagat
gaagaggttgcgccccccaagcctcctttacctggcattagggtggttgataacagtcca
ccagcattgccacccaagaaaagacagtcagcaccgtcccctacccgggtggctgtggta
gcccccatgagtcgggccaccagtggctccagtttgcctgttggaattaataggcaggat
tttgaggttgactgttatgcacagaggcgactgtcagggggcagccactcatatggcgga
gagtctccccgcctctccccctgcagcagcataggcaagctcagcaagtcggatgagcag
ctctcttctctggacagggacagtggacagtgctcccggaacacaagctgtgaaacacta
gatcactatgatcctgactatgaattcctccagcaagacctctccaacacagaccagata
cctcagcacgtggcctgcaaccttagcccgctgccagagtccttgggggagactgggtct
ccgtttcccagcaatcctttccagctgcctcttggaagctgtccccagtctgagggaccc
tctgccctggggcggcagacagacacaccacctgctttgcctgagaagaagcgtcggagc
gcagcttcccaggcctcggacagtgctggctgcagggcatcctatgagcggcacccctcg
cagtacgacaacatccccgaggacgacctacagaacccggccccggccccagctctcccc
tacacgcccttcgctgctgtcctcccctttcagcaaggaggctcctcagcccccatcgag
tttgtgggtgattttactgctcctgagtcagcgggggatccagagcagccacctcctcta
ccagagaagaaaaacaaacacatgctggcctacatgcagttgctggaggactactcagag
ccgcagccctccatgttctaccagacgccacagaacgagcacatttaccagcagaagaac
aagctactcatggaagtgtacggtttcaacgactccttcagtggcggggattctctgcag
gaactggccccaccgcccgccctgccccccaaacagcggcagctgcaggcctcctatgct
gcttcttccttctcctctgtctcctactgtgtgcagcaaactaaagtggccttcaccccc
gaggacggcagtgccactcagggcctcagtgtgtccgtgtctaactcctttctcagccgg
cacggcagcttgcctgtgccctcgtacaaatctgtgtttaggtcctactcccaggacttc
gtgcctcaccaccaggcttccgtccaacctttccttccgcctacctcctcttcctctccg
catttcccacctgtccacccgtctcagagctcggacttggcggtgcctgccgtagccggt
ccgcctcccagcaccatgaccgggcctctctcatcctctcaggagagcagctttcatggg
aacactgtctgccttccttccgaaacctcttgcgctgactcgagcgaaaacgccagtgag
gaagctggtgagggtgaatatgtcagtctgtattcctctggccagagcagcgaggagctg
gctccctctcgaggagaatcaccagctgggaaagacggacattccagagatccctcagct
gttggcagtgcccctgggaaggacagcagagatggtggtgagaggtccccaaagtcacct
gacactctggagtcagctcagtcggaggaggaagtagatgagctgtcccttattgaccac
aacgaaattatggccaggctgacactcaagcaagagggagatgatgggccagatgtacgt
ggaggatctggagacatcttactggttcatgctactgagacagacaggaaagatctggtg
ctgtactgcgaagccttcctgaccacctacaggacctttatcagccctgaggagctcatc
aagaaactgcagtaccgctatgagaaattctctcccttcgccgacacattcaagaagcgc
gtcagcaagaacacgttcttcgtgctggtgcgggtggtggatgagctctgcctggtggag
ctgacagaggagatcctgaagctgctgatggagctggtcttccgcctggtgtgcaatggg
gagctcagcctggctcgcgtgctccggaagaacatcctagacaaggtggaccagaagagg
ctgctcaggtgtgccaactccgaccagcccctggcagcccggggtgttgcagccaggcca
gggaccttgcatgactttcacagtcatgaaatagccgagcagctgacactgctggatgct
gagctcttctataaaatagagattcctgaggttttactttgggcaaaagaacagaatgag
gagaagagccctaacctgacccagttcacagagcatttcaacaacatgtcctactgggtc
cggtccataatcatgttacaggaaaaagcccaggacagggagcggctgctcttaaagttc
atcaagatcatgaagcacctgcggaagctgaataacttcaactcctacctggccattctc
tcagcgctggattcggcacccatccgtcggctggagtggcagaagcagacctcagagggc
ctggctgagtactgcactctgattgacagctcatcctccttccgagcctaccgggcggcc
ctctcagaggtggagcccccctgcatcccatacctgggtctgatcctgcaggacctgacc
tttgtccacctggggaacccagactacatcgatggcaaagtgaacttttccaaacggtgg
cagcagttcaacatcctcgacagcatgcggtgcttccagcaggcgcattacgacatccgg
agaaacgacgacattataaacttcttcaatgacttcagtgaccacttggccgaggaggcc
ctatgggaactctctttgaaaattaagcccaggaacataacaaggaggaaaacagatcgg
gaagagaagacctag
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integrated database retrieval system
