KEGG   Marmota marmota marmota (Alpine marmot): 107152388
Entry
107152388         CDS       T09644                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018  RNA degradation
mmma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107152388
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107152388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107152388
   03041 Spliceosome [BR:mmma03041]
    107152388
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107152388
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107152388
Spliceosome [BR:mmma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107152388
SSDB
Motif
Pfam: LSM ZSWIM4-8_C
Other DBs
NCBI-GeneID: 107152388
NCBI-ProteinID: XP_048656063
Ensembl: ENSMMMG00000008302
UniProt: A0A8C5Z4W3
LinkDB
Position
Unknown
AA seq 91 aa
MAANSTTSPSKLLLLELVDKCIGSRIHIVMKSDKEIVGTHLGFDDFVNMVLEDVTEFKIT
PEGRRITKLNQILLSGNNITMMVSRGKGSEV
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcagctaactctacaaccagcccatcaaagctgctactgctagaacttgtggacaag
tgcataggatcaagaattcacattgtgatgaagagtgataaggaaattgttggaacacat
ctaggatttgatgactttgtcaatatggtgctggaagatgtcactgagtttaaaatcacc
ccagaaggtagaaggattactaaattaaatcagattttgctaagtggaaataatataaca
atgatggtttctagaggaaaaggatctgaggtatga

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